Back to the "Multiple platform build/check report" A  B [C] D  E  F  G  H  I  J  K  L  M  N  O  P  Q  R  S  T  U  V  W  X  Y  Z 

BioC 3.3: BUILD report for coMET on zin2

This page was generated on 2016-10-13 12:45:16 -0700 (Thu, 13 Oct 2016).

Package 229/1210HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
coMET 1.4.4
Tiphaine Martin
Snapshot Date: 2016-10-12 17:20:15 -0700 (Wed, 12 Oct 2016)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_3_3/madman/Rpacks/coMET
Last Changed Rev: 118502 / Revision: 122332
Last Changed Date: 2016-06-12 09:31:06 -0700 (Sun, 12 Jun 2016)
zin2 Linux (Ubuntu 14.04.2 LTS) / x86_64  NotNeeded [ ERROR ] skipped 
moscato2 Windows Server 2008 R2 Enterprise SP1 (64-bit) / x64  NotNeeded  OK  OK  OK UNNEEDED, same version exists in internal repository
oaxaca Mac OS X Mavericks (10.9.5) / x86_64  NotNeeded  ERROR  skipped  skipped 

Summary

Package: coMET
Version: 1.4.4
Command: /home/biocbuild/bbs-3.3-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data coMET
StartedAt: 2016-10-12 21:54:22 -0700 (Wed, 12 Oct 2016)
EndedAt: 2016-10-12 21:55:11 -0700 (Wed, 12 Oct 2016)
EllapsedTime: 49.2 seconds
RetCode: 1
Status:  ERROR 
PackageFile: None
PackageFileSize: NA

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   /home/biocbuild/bbs-3.3-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data coMET
###
##############################################################################
##############################################################################


* checking for file ‘coMET/DESCRIPTION’ ... OK
* preparing ‘coMET’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
Quitting from lines 325-333 (coMET.Rnw) 
Error: processing vignette 'coMET.Rnw' failed with diagnostics:
Failed to set session genome to 'hg19'
Execution halted