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BioC 3.3: CHECK report for clipper on moscato2

This page was generated on 2016-10-13 12:51:11 -0700 (Thu, 13 Oct 2016).

Package 196/1210HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
clipper 1.12.0
Paolo Martini
Snapshot Date: 2016-10-12 17:20:15 -0700 (Wed, 12 Oct 2016)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_3_3/madman/Rpacks/clipper
Last Changed Rev: 117079 / Revision: 122332
Last Changed Date: 2016-05-03 14:20:18 -0700 (Tue, 03 May 2016)
zin2 Linux (Ubuntu 14.04.2 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
moscato2 Windows Server 2008 R2 Enterprise SP1 (64-bit) / x64  OK  OK [ ERROR ] OK 
oaxaca Mac OS X Mavericks (10.9.5) / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: clipper
Version: 1.12.0
Command: rm -rf clipper.buildbin-libdir clipper.Rcheck && mkdir clipper.buildbin-libdir clipper.Rcheck && E:\biocbld\bbs-3.3-bioc\R\bin\R.exe CMD INSTALL --build --merge-multiarch --library=clipper.buildbin-libdir clipper_1.12.0.tar.gz >clipper.Rcheck\00install.out 2>&1 && cp clipper.Rcheck\00install.out clipper-install.out && E:\biocbld\bbs-3.3-bioc\R\bin\R.exe CMD check --library=clipper.buildbin-libdir --install="check:clipper-install.out" --force-multiarch --no-vignettes --timings clipper_1.12.0.tar.gz
StartedAt: 2016-10-13 02:11:01 -0700 (Thu, 13 Oct 2016)
EndedAt: 2016-10-13 02:12:02 -0700 (Thu, 13 Oct 2016)
EllapsedTime: 60.7 seconds
RetCode: 1
Status:  ERROR  
CheckDir: clipper.Rcheck
Warnings: NA

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   rm -rf clipper.buildbin-libdir clipper.Rcheck && mkdir clipper.buildbin-libdir clipper.Rcheck && E:\biocbld\bbs-3.3-bioc\R\bin\R.exe CMD INSTALL --build --merge-multiarch --library=clipper.buildbin-libdir clipper_1.12.0.tar.gz >clipper.Rcheck\00install.out 2>&1 && cp clipper.Rcheck\00install.out clipper-install.out  && E:\biocbld\bbs-3.3-bioc\R\bin\R.exe CMD check --library=clipper.buildbin-libdir --install="check:clipper-install.out" --force-multiarch --no-vignettes --timings clipper_1.12.0.tar.gz
###
##############################################################################
##############################################################################


* using log directory 'E:/biocbld/bbs-3.3-bioc/meat/clipper.Rcheck'
* using R version 3.3.1 (2016-06-21)
* using platform: x86_64-w64-mingw32 (64-bit)
* using session charset: ISO8859-1
* using option '--no-vignettes'
* checking for file 'clipper/DESCRIPTION' ... OK
* this is package 'clipper' version '1.12.0'
* checking package namespace information ... OK
* checking package dependencies ... ERROR
Package suggested but not available: 'RCytoscape'

The suggested packages are required for a complete check.
Checking can be attempted without them by setting the environment
variable _R_CHECK_FORCE_SUGGESTS_ to a false value.

See section 'The DESCRIPTION file' in the 'Writing R Extensions'
manual.
* DONE

Status: 1 ERROR
See
  'E:/biocbld/bbs-3.3-bioc/meat/clipper.Rcheck/00check.log'
for details.