############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/R/R/bin/R CMD build --keep-empty-dirs --no-resave-data synapter ### ############################################################################## ############################################################################## * checking for file ‘synapter/DESCRIPTION’ ... OK * preparing ‘synapter’: * checking DESCRIPTION meta-information ... OK * installing the package to build vignettes * creating vignettes ... ERROR --- re-building ‘fragmentmatching.Rmd’ using rmarkdown Quitting from lines 30-34 [environment] (fragmentmatching.Rmd) Error: processing vignette 'fragmentmatching.Rmd' failed with diagnostics: there is no package called 'synapterdata' --- failed re-building ‘fragmentmatching.Rmd’ --- re-building ‘synapter.Rmd’ using rmarkdown Quitting from lines 36-43 [environment] (synapter.Rmd) Error: processing vignette 'synapter.Rmd' failed with diagnostics: there is no package called 'synapterdata' --- failed re-building ‘synapter.Rmd’ --- re-building ‘synapter2.Rmd’ using rmarkdown Quitting from lines 29-33 [environment] (synapter2.Rmd) Error: processing vignette 'synapter2.Rmd' failed with diagnostics: there is no package called 'synapterdata' --- failed re-building ‘synapter2.Rmd’ SUMMARY: processing the following files failed: ‘fragmentmatching.Rmd’ ‘synapter.Rmd’ ‘synapter2.Rmd’ Error: Vignette re-building failed. Execution halted