############################################################################## ############################################################################## ### ### Running command: ### ### chmod a+r ChAMP -R && C:\Users\biocbuild\bbs-3.20-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data ChAMP ### ############################################################################## ############################################################################## * checking for file 'ChAMP/DESCRIPTION' ... OK * preparing 'ChAMP': * checking DESCRIPTION meta-information ... OK * installing the package to build vignettes * creating vignettes ... ERROR --- re-building 'ChAMP.Rmd' using rmarkdown pandoc-citeproc.exe: PandocHttpError "http://www.zotero.org/styles/american-medical-association" (HttpExceptionRequest Request { host = "www.zotero.org" port = 80 secure = False requestHeaders = [] path = "/styles/american-medical-association" queryString = "" method = "GET" proxy = Nothing rawBody = False redirectCount = 10 responseTimeout = ResponseTimeoutDefault requestVersion = HTTP/1.1 } (ConnectionFailure user error (Network.Socket.gai_strerror not supported: 11001))) Error running filter C:/PROGRA~1/Pandoc/pandoc-citeproc.exe: Filter returned error status 1 Error: processing vignette 'ChAMP.Rmd' failed with diagnostics: pandoc document conversion failed with error 83 --- failed re-building 'ChAMP.Rmd' SUMMARY: processing the following file failed: 'ChAMP.Rmd' Error: Vignette re-building failed. Execution halted