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BioC 3.2: INSTALL report for ACME on zin1

This page was generated on 2016-04-23 10:10:40 -0700 (Sat, 23 Apr 2016).

Package 12/1103HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
ACME 2.26.0
Sean Davis
Snapshot Date: 2016-04-22 16:20:12 -0700 (Fri, 22 Apr 2016)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_3_2/madman/Rpacks/ACME
Last Changed Rev: 109589 / Revision: 116712
Last Changed Date: 2015-10-13 12:36:05 -0700 (Tue, 13 Oct 2015)
zin1 Linux (Ubuntu 14.04.2 LTS) / x86_64 [ OK ] OK  OK UNNEEDED, same version exists in internal repository
moscato1 Windows Server 2008 R2 Standard (64-bit) / x64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository
oaxaca Mac OS X Mavericks (10.9.5) / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: ACME
Version: 2.26.0
Command: /home/biocbuild/bbs-3.2-bioc/R/bin/R CMD INSTALL ACME
StartedAt: 2016-04-22 17:02:15 -0700 (Fri, 22 Apr 2016)
EndedAt: 2016-04-22 17:02:19 -0700 (Fri, 22 Apr 2016)
EllapsedTime: 3.5 seconds
RetCode: 0
Status:  OK 

Command output

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###
### Running command:
###
###   /home/biocbuild/bbs-3.2-bioc/R/bin/R CMD INSTALL ACME
###
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* installing to library ‘/home/biocbuild/bbs-3.2-bioc/R/library’
* installing *source* package ‘ACME’ ...
** libs
gcc -std=gnu99 -I/home/biocbuild/bbs-3.2-bioc/R/include -DNDEBUG  -I/usr/local/include    -fpic  -g -O2  -Wall -c windowChisq.c -o windowChisq.o
windowChisq.c: In function ‘windowChisq’:
windowChisq.c:58:14: warning: suggest parentheses around comparison in operand of ‘&’ [-Wparentheses]
    firstprobe>0) {
              ^
windowChisq.c:63:13: warning: suggest parentheses around comparison in operand of ‘&’ [-Wparentheses]
    lastprobe<(na-1)) {
             ^
windowChisq.c:21:11: warning: unused variable ‘xa’ [-Wunused-variable]
   double *xa,*xlocations,*xchivals;
           ^
windowChisq.c: At top level:
windowChisq.c:86:5: warning: initialization from incompatible pointer type [enabled by default]
     {"windowChisq",&windowChisq,5},
     ^
windowChisq.c:86:5: warning: (near initialization for ‘callMethods[0].fun’) [enabled by default]
gcc -std=gnu99 -shared -L/home/biocbuild/bbs-3.2-bioc/R/lib -L/usr/local/lib -o ACME.so windowChisq.o -L/home/biocbuild/bbs-3.2-bioc/R/lib -lR
installing to /home/biocbuild/bbs-3.2-bioc/R/library/ACME/libs
** R
** data
** inst
** preparing package for lazy loading
Creating a generic function for ‘print’ from package ‘base’ in package ‘ACME’
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded
* DONE (ACME)