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This page was generated on 2023-06-02 11:02:11 -0400 (Fri, 02 Jun 2023).

HostnameOSArch (*)R versionInstalled pkgs
kjohnson2macOS 12.6.1 Montereyarm644.3.0 RC (2023-04-13 r84266) -- "Already Tomorrow" 4269
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BUILD BIN results for DeepBlueR on kjohnson2


To the developers/maintainers of the DeepBlueR package:
Use the following Renviron settings to reproduce errors and warnings.

Note: If "R CMD check" recently failed on the Linux builder over a missing dependency, add the missing dependency to "Suggests" in your DESCRIPTION file. See the Renviron.bioc for details.

raw results

Package 511/2229HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
DeepBlueR 1.26.0  (landing page)
Felipe Albrecht , Markus List , Quirin Manz
Snapshot Date: 2023-05-28 13:00:06 -0400 (Sun, 28 May 2023)
git_url: https://git.bioconductor.org/packages/DeepBlueR
git_branch: RELEASE_3_17
git_last_commit: 422a55a
git_last_commit_date: 2023-04-25 10:48:12 -0400 (Tue, 25 Apr 2023)
kjohnson2macOS 12.6.1 Monterey / arm64  OK    OK    OK    ERROR  

Summary

Package: DeepBlueR
Version: 1.26.0
Command: rm -rf DeepBlueR.buildbin-libdir && mkdir DeepBlueR.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh DeepBlueR_1.26.0.tar.gz /Library/Frameworks/R.framework/Resources/bin/R DeepBlueR.buildbin-libdir
StartedAt: 2023-06-01 07:12:58 -0400 (Thu, 01 Jun 2023)
EndedAt: 2023-06-01 07:13:59 -0400 (Thu, 01 Jun 2023)
EllapsedTime: 61.5 seconds
RetCode: 1
Status:   ERROR  
PackageFile: None
PackageFileSize: NA

Command output

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###
### Running command:
###
###   rm -rf DeepBlueR.buildbin-libdir && mkdir DeepBlueR.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh DeepBlueR_1.26.0.tar.gz /Library/Frameworks/R.framework/Resources/bin/R DeepBlueR.buildbin-libdir
###
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>>>>>>> 
>>>>>>> INSTALLATION WITH 'R CMD INSTALL --preclean --no-multiarch --library=DeepBlueR.buildbin-libdir DeepBlueR_1.26.0.tar.gz'
>>>>>>> 

* installing *source* package ‘DeepBlueR’ ...
** using staged installation
** R
** demo
** inst
** byte-compile and prepare package for lazy loading
status 
 "503" 
Error in xml.rpc(deepblue_options("url"), "list_column_types", user_key) : 
  Problems
Error: unable to load R code in package ‘DeepBlueR’
Execution halted
ERROR: lazy loading failed for package ‘DeepBlueR’
* removing ‘/Users/biocbuild/bbs-3.17-bioc-mac-arm64/meat/DeepBlueR.buildbin-libdir/DeepBlueR’