############################################################################## ############################################################################## ### ### Running command: ### ### /Library/Frameworks/R.framework/Resources/bin/R CMD INSTALL NetPathMiner ### ############################################################################## ############################################################################## * installing to library ‘/Library/Frameworks/R.framework/Versions/4.3-x86_64/Resources/library’ * installing *source* package ‘NetPathMiner’ ... ** using staged installation 'config' variable 'CPP' is defunct checking for gcc... clang -arch x86_64 checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether clang -arch x86_64 accepts -g... yes checking for clang -arch x86_64 option to accept ISO C89... none needed checking how to run the C preprocessor... clang -arch x86_64 -E checking for xmlParseFile in -lxml2... yes checking for readSBML in -lsbml... no untarring boost include tree... SBML not found. libXML2 found checking for xml2-config... /usr/bin/xml2-config configure: creating ./config.status config.status: creating src/Makevars ** libs using C compiler: ‘Apple clang version 14.0.0 (clang-1400.0.29.202)’ using C++ compiler: ‘Apple clang version 14.0.0 (clang-1400.0.29.202)’ using SDK: ‘MacOSX11.3.sdk’ clang++ -arch x86_64 -std=gnu++17 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I. -I/opt/R/x86_64/include -DHAVE_XML -I/Library/Developer/CommandLineTools/SDKs/MacOSX11.sdk/usr/include -I/opt/R/x86_64/include -fPIC -falign-functions=64 -Wall -g -O2 -c PathRanker.cpp -o PathRanker.o In file included from PathRanker.cpp:27: In file included from ./boost/graph/graph_utility.hpp:30: In file included from ./boost/graph/properties.hpp:19: In file included from ./boost/property_map/property_map.hpp:844: In file included from ./boost/property_map/vector_property_map.hpp:14: In file included from ./boost/shared_ptr.hpp:17: In file included from ./boost/smart_ptr/shared_ptr.hpp:32: ./boost/smart_ptr/detail/shared_count.hpp:323:33: error: no template named 'auto_ptr' in namespace 'std' explicit shared_count( std::auto_ptr & r ): pi_( new sp_counted_impl_p( r.get() ) ) ~~~~~^ In file included from PathRanker.cpp:27: In file included from ./boost/graph/graph_utility.hpp:30: In file included from ./boost/graph/properties.hpp:19: In file included from ./boost/property_map/property_map.hpp:844: In file included from ./boost/property_map/vector_property_map.hpp:14: In file included from ./boost/shared_ptr.hpp:17: ./boost/smart_ptr/shared_ptr.hpp:247:65: error: no member named 'auto_ptr' in namespace 'std' template< class T, class R > struct sp_enable_if_auto_ptr< std::auto_ptr< T >, R > ~~~~~^ ./boost/smart_ptr/shared_ptr.hpp:247:75: error: 'T' does not refer to a value template< class T, class R > struct sp_enable_if_auto_ptr< std::auto_ptr< T >, R > ^ ./boost/smart_ptr/shared_ptr.hpp:247:17: note: declared here template< class T, class R > struct sp_enable_if_auto_ptr< std::auto_ptr< T >, R > ^ ./boost/smart_ptr/shared_ptr.hpp:247:78: error: expected unqualified-id template< class T, class R > struct sp_enable_if_auto_ptr< std::auto_ptr< T >, R > ^ ./boost/smart_ptr/shared_ptr.hpp:446:31: error: no template named 'auto_ptr' in namespace 'std' explicit shared_ptr( std::auto_ptr & r ): px(r.get()), pn() ~~~~~^ ./boost/smart_ptr/shared_ptr.hpp:459:22: error: no template named 'auto_ptr' in namespace 'std' shared_ptr( std::auto_ptr && r ): px(r.get()), pn() ~~~~~^ ./boost/smart_ptr/shared_ptr.hpp:525:34: error: no template named 'auto_ptr' in namespace 'std' shared_ptr & operator=( std::auto_ptr & r ) ~~~~~^ ./boost/smart_ptr/shared_ptr.hpp:534:34: error: no template named 'auto_ptr' in namespace 'std' shared_ptr & operator=( std::auto_ptr && r ) ~~~~~^ ./boost/smart_ptr/shared_ptr.hpp:536:38: error: no template named 'auto_ptr' in namespace 'std' this_type( static_cast< std::auto_ptr && >( r ) ).swap( *this ); ~~~~~^ In file included from PathRanker.cpp:28: In file included from ./boost/graph/adjacency_list.hpp:31: In file included from ./boost/scoped_ptr.hpp:14: ./boost/smart_ptr/scoped_ptr.hpp:68:31: error: no template named 'auto_ptr' in namespace 'std' explicit scoped_ptr( std::auto_ptr p ) BOOST_NOEXCEPT : px( p.release() ) ~~~~~^ In file included from PathRanker.cpp:28: In file included from ./boost/graph/adjacency_list.hpp:246: ./boost/graph/detail/adjacency_list.hpp:278:12: error: no template named 'auto_ptr' in namespace 'std' std::auto_ptr m_property; ~~~~~^ PathRanker.cpp:127:16: error: no matching function for call to 'num_vertices' SizeType n = num_vertices(g); ^~~~~~~~~~~~ ./boost/graph/detail/adjacency_list.hpp:1565:5: note: candidate template ignored: deduced type 'const adj_list_helper>, boost::property>>>, boost::vecS, boost::vecS, boost::bidirectionalS, boost::property>, boost::property>>, boost::no_property, boost::listS>::config, boost::bidirectional_graph_helper_with_property>, boost::property>>>, boost::vecS, boost::vecS, boost::bidirectionalS, boost::property>, boost::property>>, boost::no_property, boost::listS>::config>>' of 1st parameter does not match adjusted type 'Graph' (aka 'adjacency_list, allocator>>, property, allocator>>>>') of argument [with Config = boost::detail::adj_list_gen>, boost::property>>>, boost::vecS, boost::vecS, boost::bidirectionalS, boost::property>, boost::property>>, boost::no_property, boost::listS>::config, Base = boost::bidirectional_graph_helper_with_property>, boost::property>>>, boost::vecS, boost::vecS, boost::bidirectionalS, boost::property>, boost::property>>, boost::no_property, boost::listS>::config>] num_vertices(const adj_list_helper& g_) ^ PathRanker.cpp:128:27: error: no matching function for call to 'get' EdgeWeightMap weight = get(edge_weight, g); ^~~ ./boost/property_map/property_map.hpp:179:19: note: candidate template ignored: could not match 'const T *' against 'boost::edge_weight_t' inline const T& get(const T* pa, std::ptrdiff_t k) { return pa[k]; } ^ ./boost/property_map/property_map.hpp:215:3: note: candidate template ignored: could not match 'readable_property_map_archetype' against 'boost::edge_weight_t' get(const readable_property_map_archetype&, ^ ./boost/property_map/property_map.hpp:352:3: note: candidate template ignored: could not match 'put_get_helper' against 'boost::edge_weight_t' get(const put_get_helper& pa, const K& k) ^ ./boost/graph/detail/adjacency_list.hpp:332:3: note: candidate template ignored: could not match 'stored_edge_property' against 'adjacency_list' get(Tag property_tag, ^ ./boost/graph/detail/adjacency_list.hpp:340:3: note: candidate template ignored: could not match 'stored_edge_iter' against 'adjacency_list' get(Tag property_tag, ^ ./boost/graph/detail/adjacency_list.hpp:348:3: note: candidate template ignored: could not match 'stored_ra_edge_iter' against 'adjacency_list' get(Tag property_tag, ^ ./boost/graph/detail/adjacency_list.hpp:1681:5: note: candidate template ignored: deduced type 'adj_list_helper>, boost::property>>>, boost::vecS, boost::vecS, boost::bidirectionalS, boost::property>, boost::property>>, boost::no_property, boost::listS>::config, boost::bidirectional_graph_helper_with_property>, boost::property>>>, boost::vecS, boost::vecS, boost::bidirectionalS, boost::property>, boost::property>>, boost::no_property, boost::listS>::config>>' of 2nd parameter does not match adjusted type 'Graph' (aka 'adjacency_list, allocator>>, property, allocator>>>>') of argument [with Config = boost::detail::adj_list_gen>, boost::property>>>, boost::vecS, boost::vecS, boost::bidirectionalS, boost::property>, boost::property>>, boost::no_property, boost::listS>::config, Base = boost::bidirectional_graph_helper_with_property>, boost::property>>>, boost::vecS, boost::vecS, boost::bidirectionalS, boost::property>, boost::property>>, boost::no_property, boost::listS>::config>, Property = boost::edge_weight_t] get(Property p, adj_list_helper& g) { ^ ./boost/graph/detail/adjacency_list.hpp:1689:5: note: candidate template ignored: deduced type 'const adj_list_helper>, boost::property>>>, boost::vecS, boost::vecS, boost::bidirectionalS, boost::property>, boost::property>>, boost::no_property, boost::listS>::config, boost::bidirectional_graph_helper_with_property>, boost::property>>>, boost::vecS, boost::vecS, boost::bidirectionalS, boost::property>, boost::property>>, boost::no_property, boost::listS>::config>>' of 2nd parameter does not match adjusted type 'Graph' (aka 'adjacency_list, allocator>>, property, allocator>>>>') of argument [with Config = boost::detail::adj_list_gen>, boost::property>>>, boost::vecS, boost::vecS, boost::bidirectionalS, boost::property>, boost::property>>, boost::no_property, boost::listS>::config, Base = boost::bidirectional_graph_helper_with_property>, boost::property>>>, boost::vecS, boost::vecS, boost::bidirectionalS, boost::property>, boost::property>>, boost::no_property, boost::listS>::config>, Property = boost::edge_weight_t] get(Property p, const adj_list_helper& g) { ^ /Library/Developer/CommandLineTools/SDKs/MacOSX11.sdk/usr/include/c++/v1/tuple:1008:1: note: candidate function template not viable: requires single argument '__t', but 2 arguments were provided get(tuple<_Tp...>& __t) _NOEXCEPT ^ /Library/Developer/CommandLineTools/SDKs/MacOSX11.sdk/usr/include/c++/v1/tuple:1017:1: note: candidate function template not viable: requires single argument '__t', but 2 arguments were provided get(const tuple<_Tp...>& __t) _NOEXCEPT ^ /Library/Developer/CommandLineTools/SDKs/MacOSX11.sdk/usr/include/c++/v1/tuple:1026:1: note: candidate function template not viable: requires single argument '__t', but 2 arguments were provided get(tuple<_Tp...>&& __t) _NOEXCEPT ^ /Library/Developer/CommandLineTools/SDKs/MacOSX11.sdk/usr/include/c++/v1/tuple:1036:1: note: candidate function template not viable: requires single argument '__t', but 2 arguments were provided get(const tuple<_Tp...>&& __t) _NOEXCEPT ^ /Library/Developer/CommandLineTools/SDKs/MacOSX11.sdk/usr/include/c++/v1/utility:769:1: note: candidate function template not viable: requires single argument '__p', but 2 arguments were provided get(pair<_T1, _T2>& __p) _NOEXCEPT ^ /Library/Developer/CommandLineTools/SDKs/MacOSX11.sdk/usr/include/c++/v1/utility:777:1: note: candidate function template not viable: requires single argument '__p', but 2 arguments were provided get(const pair<_T1, _T2>& __p) _NOEXCEPT ^ /Library/Developer/CommandLineTools/SDKs/MacOSX11.sdk/usr/include/c++/v1/utility:786:1: note: candidate function template not viable: requires single argument '__p', but 2 arguments were provided get(pair<_T1, _T2>&& __p) _NOEXCEPT ^ /Library/Developer/CommandLineTools/SDKs/MacOSX11.sdk/usr/include/c++/v1/utility:794:1: note: candidate function template not viable: requires single argument '__p', but 2 arguments were provided get(const pair<_T1, _T2>&& __p) _NOEXCEPT ^ /Library/Developer/CommandLineTools/SDKs/MacOSX11.sdk/usr/include/c++/v1/array:447:1: note: candidate function template not viable: requires single argument '__a', but 2 arguments were provided get(array<_Tp, _Size>& __a) _NOEXCEPT ^ /Library/Developer/CommandLineTools/SDKs/MacOSX11.sdk/usr/include/c++/v1/array:456:1: note: candidate function template not viable: requires single argument '__a', but 2 arguments were provided get(const array<_Tp, _Size>& __a) _NOEXCEPT ^ /Library/Developer/CommandLineTools/SDKs/MacOSX11.sdk/usr/include/c++/v1/array:467:1: note: candidate function template not viable: requires single argument '__a', but 2 arguments were provided get(array<_Tp, _Size>&& __a) _NOEXCEPT ^ /Library/Developer/CommandLineTools/SDKs/MacOSX11.sdk/usr/include/c++/v1/array:476:1: note: candidate function template not viable: requires single argument '__a', but 2 arguments were provided get(const array<_Tp, _Size>&& __a) _NOEXCEPT ^ /Library/Developer/CommandLineTools/SDKs/MacOSX11.sdk/usr/include/c++/v1/utility:803:17: note: candidate function template not viable: requires single argument '__p', but 2 arguments were provided constexpr _T1 & get(pair<_T1, _T2>& __p) _NOEXCEPT ^ /Library/Developer/CommandLineTools/SDKs/MacOSX11.sdk/usr/include/c++/v1/utility:810:23: note: candidate function template not viable: requires single argument '__p', but 2 arguments were provided constexpr _T1 const & get(pair<_T1, _T2> const& __p) _NOEXCEPT ^ /Library/Developer/CommandLineTools/SDKs/MacOSX11.sdk/usr/include/c++/v1/utility:817:18: note: candidate function template not viable: requires single argument '__p', but 2 arguments were provided constexpr _T1 && get(pair<_T1, _T2>&& __p) _NOEXCEPT ^ /Library/Developer/CommandLineTools/SDKs/MacOSX11.sdk/usr/include/c++/v1/utility:824:24: note: candidate function template not viable: requires single argument '__p', but 2 arguments were provided constexpr _T1 const && get(pair<_T1, _T2> const&& __p) _NOEXCEPT ^ /Library/Developer/CommandLineTools/SDKs/MacOSX11.sdk/usr/include/c++/v1/utility:831:17: note: candidate function template not viable: requires single argument '__p', but 2 arguments were provided constexpr _T1 & get(pair<_T2, _T1>& __p) _NOEXCEPT ^ /Library/Developer/CommandLineTools/SDKs/MacOSX11.sdk/usr/include/c++/v1/utility:838:23: note: candidate function template not viable: requires single argument '__p', but 2 arguments were provided constexpr _T1 const & get(pair<_T2, _T1> const& __p) _NOEXCEPT ^ /Library/Developer/CommandLineTools/SDKs/MacOSX11.sdk/usr/include/c++/v1/utility:845:18: note: candidate function template not viable: requires single argument '__p', but 2 arguments were provided constexpr _T1 && get(pair<_T2, _T1>&& __p) _NOEXCEPT ^ /Library/Developer/CommandLineTools/SDKs/MacOSX11.sdk/usr/include/c++/v1/utility:852:24: note: candidate function template not viable: requires single argument '__p', but 2 arguments were provided constexpr _T1 const && get(pair<_T2, _T1> const&& __p) _NOEXCEPT ^ /Library/Developer/CommandLineTools/SDKs/MacOSX11.sdk/usr/include/c++/v1/tuple:1085:16: note: candidate function template not viable: requires single argument '__tup', but 2 arguments were provided constexpr _T1& get(tuple<_Args...>& __tup) noexcept ^ /Library/Developer/CommandLineTools/SDKs/MacOSX11.sdk/usr/include/c++/v1/tuple:1092:22: note: candidate function template not viable: requires single argument '__tup', but 2 arguments were provided constexpr _T1 const& get(tuple<_Args...> const& __tup) noexcept ^ /Library/Developer/CommandLineTools/SDKs/MacOSX11.sdk/usr/include/c++/v1/tuple:1099:17: note: candidate function template not viable: requires single argument '__tup', but 2 arguments were provided constexpr _T1&& get(tuple<_Args...>&& __tup) noexcept ^ /Library/Developer/CommandLineTools/SDKs/MacOSX11.sdk/usr/include/c++/v1/tuple:1106:23: note: candidate function template not viable: requires single argument '__tup', but 2 arguments were provided constexpr _T1 const&& get(tuple<_Args...> const&& __tup) noexcept ^ ./boost/tuple/detail/tuple_basic.hpp:211:1: note: candidate function not viable: requires single argument 'c', but 2 arguments were provided get(cons& c BOOST_APPEND_EXPLICIT_TEMPLATE_NON_TYPE(int, N)) { ^ ./boost/tuple/detail/tuple_basic.hpp:225:1: note: candidate function not viable: requires single argument 'c', but 2 arguments were provided get(const cons& c BOOST_APPEND_EXPLICIT_TEMPLATE_NON_TYPE(int, N)) { ^ ./boost/multi_index_container.hpp:747:1: note: candidate function not viable: requires single argument 'm', but 2 arguments were provided get( ^ ./boost/multi_index_container.hpp:771:1: note: candidate function not viable: requires single argument 'm', but 2 arguments were provided get( ^ ./boost/multi_index_container.hpp:816:1: note: candidate function not viable: requires single argument 'm', but 2 arguments were provided get( ^ ./boost/multi_index_container.hpp:836:1: note: candidate function not viable: requires single argument 'm', but 2 arguments were provided get( ^ ./boost/optional/optional.hpp:679:1: note: candidate function template not viable: requires single argument 'opt', but 2 arguments were provided get ( optional const& opt ) ^ ./boost/optional/optional.hpp:687:1: note: candidate function template not viable: requires single argument 'opt', but 2 arguments were provided get ( optional& opt ) ^ ./boost/optional/optional.hpp:697:1: note: candidate function template not viable: requires single argument 'opt', but 2 arguments were provided get ( optional const* opt ) ^ ./boost/optional/optional.hpp:705:1: note: candidate function template not viable: requires single argument 'opt', but 2 arguments were provided get ( optional* opt ) ^ ./boost/graph/detail/adjacency_list.hpp:1710:5: note: candidate function template not viable: requires 3 arguments, but 2 were provided get(Property p, const adj_list_helper& g, const Key& key) { ^ ./boost/graph/detail/adjacency_list.hpp:1700:5: note: candidate function template not viable: requires 3 arguments, but 2 were provided get(Property p, adj_list_helper& g, const Key& key) { ^ PathRanker.cpp:136:22: error: no matching function for call to 'vertices' for(tie(vitr,vend)=vertices(g); vitr != vend; ++vitr) { ^~~~~~~~ ./boost/graph/graph_concepts.hpp:48:48: note: candidate template ignored: substitution failure [with T = boost::adjacency_list>, boost::property>>>]: no type named 'ThereReallyIsNoMemberByThisNameInT' in 'boost::adjacency_list>, boost::property>>>' typename T::ThereReallyIsNoMemberByThisNameInT vertices(T const&); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ^ ./boost/graph/detail/adjacency_list.hpp:1556:5: note: candidate template ignored: deduced type 'const adj_list_helper>, boost::property>>>, boost::vecS, boost::vecS, boost::bidirectionalS, boost::property>, boost::property>>, boost::no_property, boost::listS>::config, boost::bidirectional_graph_helper_with_property>, boost::property>>>, boost::vecS, boost::vecS, boost::bidirectionalS, boost::property>, boost::property>>, boost::no_property, boost::listS>::config>>' of 1st parameter does not match adjusted type 'Graph' (aka 'adjacency_list, allocator>>, property, allocator>>>>') of argument [with Config = boost::detail::adj_list_gen>, boost::property>>>, boost::vecS, boost::vecS, boost::bidirectionalS, boost::property>, boost::property>>, boost::no_property, boost::listS>::config, Base = boost::bidirectional_graph_helper_with_property>, boost::property>>>, boost::vecS, boost::vecS, boost::bidirectionalS, boost::property>, boost::property>>, boost::no_property, boost::listS>::config>] vertices(const adj_list_helper& g_) ^ PathRanker.cpp:148:24: error: no matching function for call to 'adjacent_vertices' for(tie(aitr,aend)=adjacent_vertices(u,g); aitr != aend; ++aitr){ ^~~~~~~~~~~~~~~~~ ./boost/graph/detail/adjacency_list.hpp:1512:5: note: candidate template ignored: deduced type 'const adj_list_helper>, boost::property>>>, boost::vecS, boost::vecS, boost::bidirectionalS, boost::property>, boost::property>>, boost::no_property, boost::listS>::config, boost::bidirectional_graph_helper_with_property>, boost::property>>>, boost::vecS, boost::vecS, boost::bidirectionalS, boost::property>, boost::property>>, boost::no_property, boost::listS>::config>>' of 2nd parameter does not match adjusted type 'Graph' (aka 'adjacency_list, allocator>>, property, allocator>>>>') of argument [with Config = boost::detail::adj_list_gen>, boost::property>>>, boost::vecS, boost::vecS, boost::bidirectionalS, boost::property>, boost::property>>, boost::no_property, boost::listS>::config, Base = boost::bidirectional_graph_helper_with_property>, boost::property>>>, boost::vecS, boost::vecS, boost::bidirectionalS, boost::property>, boost::property>>, boost::no_property, boost::listS>::config>] adjacent_vertices(typename Config::vertex_descriptor u, ^ PathRanker.cpp:151:34: error: no matching function for call to 'edge' rhs = distance[u] + weight[edge(u,v,g).first]; ^~~~ ./boost/graph/detail/adjacency_list.hpp:1582:5: note: candidate template ignored: deduced type 'const adj_list_helper>, boost::property>>>, boost::vecS, boost::vecS, boost::bidirectionalS, boost::property>, boost::property>>, boost::no_property, boost::listS>::config, boost::bidirectional_graph_helper_with_property>, boost::property>>>, boost::vecS, boost::vecS, boost::bidirectionalS, boost::property>, boost::property>>, boost::no_property, boost::listS>::config>>' of 3rd parameter does not match adjusted type 'Graph' (aka 'adjacency_list, allocator>>, property, allocator>>>>') of argument [with Config = boost::detail::adj_list_gen>, boost::property>>>, boost::vecS, boost::vecS, boost::bidirectionalS, boost::property>, boost::property>>, boost::no_property, boost::listS>::config, Base = boost::bidirectional_graph_helper_with_property>, boost::property>>>, boost::vecS, boost::vecS, boost::bidirectionalS, boost::property>, boost::property>>, boost::no_property, boost::listS>::config>] edge(typename Config::vertex_descriptor u, ^ PathRanker.cpp:165:25: error: no matching function for call to 'num_vertices' SizeType n_vertices = num_vertices(g); ^~~~~~~~~~~~ ./boost/graph/detail/adjacency_list.hpp:1565:5: note: candidate template ignored: deduced type 'const adj_list_helper>, boost::property>>>, boost::vecS, boost::vecS, boost::bidirectionalS, boost::property>, boost::property>>, boost::no_property, boost::listS>::config, boost::bidirectional_graph_helper_with_property>, boost::property>>>, boost::vecS, boost::vecS, boost::bidirectionalS, boost::property>, boost::property>>, boost::no_property, boost::listS>::config>>' of 1st parameter does not match adjusted type 'Graph' (aka 'adjacency_list, allocator>>, property, allocator>>>>') of argument [with Config = boost::detail::adj_list_gen>, boost::property>>>, boost::vecS, boost::vecS, boost::bidirectionalS, boost::property>, boost::property>>, boost::no_property, boost::listS>::config, Base = boost::bidirectional_graph_helper_with_property>, boost::property>>>, boost::vecS, boost::vecS, boost::bidirectionalS, boost::property>, boost::property>>, boost::no_property, boost::listS>::config>] num_vertices(const adj_list_helper& g_) ^ PathRanker.cpp:231:35: error: no matching function for call to 'get' EdgeWeightMap edge_weight_map = get(edge_weight, g); ^~~ ./boost/property_map/property_map.hpp:179:19: note: candidate template ignored: could not match 'const T *' against 'boost::edge_weight_t' inline const T& get(const T* pa, std::ptrdiff_t k) { return pa[k]; } ^ ./boost/property_map/property_map.hpp:215:3: note: candidate template ignored: could not match 'readable_property_map_archetype' against 'boost::edge_weight_t' get(const readable_property_map_archetype&, ^ ./boost/property_map/property_map.hpp:352:3: note: candidate template ignored: could not match 'put_get_helper' against 'boost::edge_weight_t' get(const put_get_helper& pa, const K& k) ^ ./boost/graph/detail/adjacency_list.hpp:332:3: note: candidate template ignored: could not match 'stored_edge_property' against 'adjacency_list' get(Tag property_tag, ^ ./boost/graph/detail/adjacency_list.hpp:340:3: note: candidate template ignored: could not match 'stored_edge_iter' against 'adjacency_list' get(Tag property_tag, ^ ./boost/graph/detail/adjacency_list.hpp:348:3: note: candidate template ignored: could not match 'stored_ra_edge_iter' against 'adjacency_list' get(Tag property_tag, ^ ./boost/graph/detail/adjacency_list.hpp:1681:5: note: candidate template ignored: deduced type 'adj_list_helper>, boost::property>>>, boost::vecS, boost::vecS, boost::bidirectionalS, boost::property>, boost::property>>, boost::no_property, boost::listS>::config, boost::bidirectional_graph_helper_with_property>, boost::property>>>, boost::vecS, boost::vecS, boost::bidirectionalS, boost::property>, boost::property>>, boost::no_property, boost::listS>::config>>' of 2nd parameter does not match adjusted type 'Graph' (aka 'adjacency_list, allocator>>, property, allocator>>>>') of argument [with Config = boost::detail::adj_list_gen>, boost::property>>>, boost::vecS, boost::vecS, boost::bidirectionalS, boost::property>, boost::property>>, boost::no_property, boost::listS>::config, Base = boost::bidirectional_graph_helper_with_property>, boost::property>>>, boost::vecS, boost::vecS, boost::bidirectionalS, boost::property>, boost::property>>, boost::no_property, boost::listS>::config>, Property = boost::edge_weight_t] get(Property p, adj_list_helper& g) { ^ ./boost/graph/detail/adjacency_list.hpp:1689:5: note: candidate template ignored: deduced type 'const adj_list_helper>, boost::property>>>, boost::vecS, boost::vecS, boost::bidirectionalS, boost::property>, boost::property>>, boost::no_property, boost::listS>::config, boost::bidirectional_graph_helper_with_property>, boost::property>>>, boost::vecS, boost::vecS, boost::bidirectionalS, boost::property>, boost::property>>, boost::no_property, boost::listS>::config>>' of 2nd parameter does not match adjusted type 'Graph' (aka 'adjacency_list, allocator>>, property, allocator>>>>') of argument [with Config = boost::detail::adj_list_gen>, boost::property>>>, boost::vecS, boost::vecS, boost::bidirectionalS, boost::property>, boost::property>>, boost::no_property, boost::listS>::config, Base = boost::bidirectional_graph_helper_with_property>, boost::property>>>, boost::vecS, boost::vecS, boost::bidirectionalS, boost::property>, boost::property>>, boost::no_property, boost::listS>::config>, Property = boost::edge_weight_t] get(Property p, const adj_list_helper& g) { ^ /Library/Developer/CommandLineTools/SDKs/MacOSX11.sdk/usr/include/c++/v1/tuple:1008:1: note: candidate function template not viable: requires single argument '__t', but 2 arguments were provided get(tuple<_Tp...>& __t) _NOEXCEPT ^ /Library/Developer/CommandLineTools/SDKs/MacOSX11.sdk/usr/include/c++/v1/tuple:1017:1: note: candidate function template not viable: requires single argument '__t', but 2 arguments were provided get(const tuple<_Tp...>& __t) _NOEXCEPT ^ /Library/Developer/CommandLineTools/SDKs/MacOSX11.sdk/usr/include/c++/v1/tuple:1026:1: note: candidate function template not viable: requires single argument '__t', but 2 arguments were provided get(tuple<_Tp...>&& __t) _NOEXCEPT ^ /Library/Developer/CommandLineTools/SDKs/MacOSX11.sdk/usr/include/c++/v1/tuple:1036:1: note: candidate function template not viable: requires single argument '__t', but 2 arguments were provided get(const tuple<_Tp...>&& __t) _NOEXCEPT ^ /Library/Developer/CommandLineTools/SDKs/MacOSX11.sdk/usr/include/c++/v1/utility:769:1: note: candidate function template not viable: requires single argument '__p', but 2 arguments were provided get(pair<_T1, _T2>& __p) _NOEXCEPT ^ /Library/Developer/CommandLineTools/SDKs/MacOSX11.sdk/usr/include/c++/v1/utility:777:1: note: candidate function template not viable: requires single argument '__p', but 2 arguments were provided get(const pair<_T1, _T2>& __p) _NOEXCEPT ^ /Library/Developer/CommandLineTools/SDKs/MacOSX11.sdk/usr/include/c++/v1/utility:786:1: note: candidate function template not viable: requires single argument '__p', but 2 arguments were provided get(pair<_T1, _T2>&& __p) _NOEXCEPT ^ /Library/Developer/CommandLineTools/SDKs/MacOSX11.sdk/usr/include/c++/v1/utility:794:1: note: candidate function template not viable: requires single argument '__p', but 2 arguments were provided get(const pair<_T1, _T2>&& __p) _NOEXCEPT ^ /Library/Developer/CommandLineTools/SDKs/MacOSX11.sdk/usr/include/c++/v1/array:447:1: note: candidate function template not viable: requires single argument '__a', but 2 arguments were provided get(array<_Tp, _Size>& __a) _NOEXCEPT ^ /Library/Developer/CommandLineTools/SDKs/MacOSX11.sdk/usr/include/c++/v1/array:456:1: note: candidate function template not viable: requires single argument '__a', but 2 arguments were provided get(const array<_Tp, _Size>& __a) _NOEXCEPT ^ /Library/Developer/CommandLineTools/SDKs/MacOSX11.sdk/usr/include/c++/v1/array:467:1: note: candidate function template not viable: requires single argument '__a', but 2 arguments were provided get(array<_Tp, _Size>&& __a) _NOEXCEPT ^ /Library/Developer/CommandLineTools/SDKs/MacOSX11.sdk/usr/include/c++/v1/array:476:1: note: candidate function template not viable: requires single argument '__a', but 2 arguments were provided get(const array<_Tp, _Size>&& __a) _NOEXCEPT ^ /Library/Developer/CommandLineTools/SDKs/MacOSX11.sdk/usr/include/c++/v1/utility:803:17: note: candidate function template not viable: requires single argument '__p', but 2 arguments were provided constexpr _T1 & get(pair<_T1, _T2>& __p) _NOEXCEPT ^ /Library/Developer/CommandLineTools/SDKs/MacOSX11.sdk/usr/include/c++/v1/utility:810:23: note: candidate function template not viable: requires single argument '__p', but 2 arguments were provided constexpr _T1 const & get(pair<_T1, _T2> const& __p) _NOEXCEPT ^ /Library/Developer/CommandLineTools/SDKs/MacOSX11.sdk/usr/include/c++/v1/utility:817:18: note: candidate function template not viable: requires single argument '__p', but 2 arguments were provided constexpr _T1 && get(pair<_T1, _T2>&& __p) _NOEXCEPT ^ /Library/Developer/CommandLineTools/SDKs/MacOSX11.sdk/usr/include/c++/v1/utility:824:24: note: candidate function template not viable: requires single argument '__p', but 2 arguments were provided constexpr _T1 const && get(pair<_T1, _T2> const&& __p) _NOEXCEPT ^ /Library/Developer/CommandLineTools/SDKs/MacOSX11.sdk/usr/include/c++/v1/utility:831:17: note: candidate function template not viable: requires single argument '__p', but 2 arguments were provided constexpr _T1 & get(pair<_T2, _T1>& __p) _NOEXCEPT ^ /Library/Developer/CommandLineTools/SDKs/MacOSX11.sdk/usr/include/c++/v1/utility:838:23: note: candidate function template not viable: requires single argument '__p', but 2 arguments were provided constexpr _T1 const & get(pair<_T2, _T1> const& __p) _NOEXCEPT ^ /Library/Developer/CommandLineTools/SDKs/MacOSX11.sdk/usr/include/c++/v1/utility:845:18: note: candidate function template not viable: requires single argument '__p', but 2 arguments were provided constexpr _T1 && get(pair<_T2, _T1>&& __p) _NOEXCEPT ^ /Library/Developer/CommandLineTools/SDKs/MacOSX11.sdk/usr/include/c++/v1/utility:852:24: note: candidate function template not viable: requires single argument '__p', but 2 arguments were provided constexpr _T1 const && get(pair<_T2, _T1> const&& __p) _NOEXCEPT ^ /Library/Developer/CommandLineTools/SDKs/MacOSX11.sdk/usr/include/c++/v1/tuple:1085:16: note: candidate function template not viable: requires single argument '__tup', but 2 arguments were provided constexpr _T1& get(tuple<_Args...>& __tup) noexcept ^ /Library/Developer/CommandLineTools/SDKs/MacOSX11.sdk/usr/include/c++/v1/tuple:1092:22: note: candidate function template not viable: requires single argument '__tup', but 2 arguments were provided constexpr _T1 const& get(tuple<_Args...> const& __tup) noexcept ^ /Library/Developer/CommandLineTools/SDKs/MacOSX11.sdk/usr/include/c++/v1/tuple:1099:17: note: candidate function template not viable: requires single argument '__tup', but 2 arguments were provided constexpr _T1&& get(tuple<_Args...>&& __tup) noexcept ^ /Library/Developer/CommandLineTools/SDKs/MacOSX11.sdk/usr/include/c++/v1/tuple:1106:23: note: candidate function template not viable: requires single argument '__tup', but 2 arguments were provided constexpr _T1 const&& get(tuple<_Args...> const&& __tup) noexcept ^ ./boost/tuple/detail/tuple_basic.hpp:211:1: note: candidate function not viable: requires single argument 'c', but 2 arguments were provided get(cons& c BOOST_APPEND_EXPLICIT_TEMPLATE_NON_TYPE(int, N)) { ^ ./boost/tuple/detail/tuple_basic.hpp:225:1: note: candidate function not viable: requires single argument 'c', but 2 arguments were provided get(const cons& c BOOST_APPEND_EXPLICIT_TEMPLATE_NON_TYPE(int, N)) { ^ ./boost/multi_index_container.hpp:747:1: note: candidate function not viable: requires single argument 'm', but 2 arguments were provided get( ^ ./boost/multi_index_container.hpp:771:1: note: candidate function not viable: requires single argument 'm', but 2 arguments were provided get( ^ ./boost/multi_index_container.hpp:816:1: note: candidate function not viable: requires single argument 'm', but 2 arguments were provided get( ^ ./boost/multi_index_container.hpp:836:1: note: candidate function not viable: requires single argument 'm', but 2 arguments were provided get( ^ ./boost/optional/optional.hpp:679:1: note: candidate function template not viable: requires single argument 'opt', but 2 arguments were provided get ( optional const& opt ) ^ ./boost/optional/optional.hpp:687:1: note: candidate function template not viable: requires single argument 'opt', but 2 arguments were provided get ( optional& opt ) ^ ./boost/optional/optional.hpp:697:1: note: candidate function template not viable: requires single argument 'opt', but 2 arguments were provided get ( optional const* opt ) ^ ./boost/optional/optional.hpp:705:1: note: candidate function template not viable: requires single argument 'opt', but 2 arguments were provided get ( optional* opt ) ^ ./boost/graph/detail/adjacency_list.hpp:1710:5: note: candidate function template not viable: requires 3 arguments, but 2 were provided get(Property p, const adj_list_helper& g, const Key& key) { ^ ./boost/graph/detail/adjacency_list.hpp:1700:5: note: candidate function template not viable: requires 3 arguments, but 2 were provided get(Property p, adj_list_helper& g, const Key& key) { ^ PathRanker.cpp:286:15: error: no matching function for call to 'remove_edge' remove_edge(result[j].sequence[i], result[j].sequence[i+1], g_copy); ^~~~~~~~~~~ ./boost/graph/detail/adjacency_list.hpp:571:5: note: candidate template ignored: could not match 'directed_graph_helper' against 'adjacency_list' remove_edge(typename Config::vertex_descriptor u, ^ ./boost/graph/detail/adjacency_list.hpp:895:5: note: candidate template ignored: could not match 'undirected_graph_helper' against 'adjacency_list' remove_edge(typename Config::vertex_descriptor u, ^ ./boost/graph/detail/adjacency_list.hpp:1230:5: note: candidate template ignored: deduced type 'bidirectional_graph_helper_with_property>, boost::property>>>, boost::vecS, boost::vecS, boost::bidirectionalS, boost::property>, boost::property>>, boost::no_property, boost::listS>::config>' of 3rd parameter does not match adjusted type 'Graph' (aka 'adjacency_list, allocator>>, property, allocator>>>>') of argument [with Config = boost::detail::adj_list_gen>, boost::property>>>, boost::vecS, boost::vecS, boost::bidirectionalS, boost::property>, boost::property>>, boost::no_property, boost::listS>::config] remove_edge(typename Config::vertex_descriptor u, ^ ./boost/graph/detail/adjacency_list.hpp:609:5: note: candidate function template not viable: requires 2 arguments, but 3 were provided remove_edge(EdgeOrIter e_or_iter, directed_graph_helper& g_) ^ ./boost/graph/detail/adjacency_list.hpp:884:5: note: candidate function template not viable: requires 2 arguments, but 3 were provided remove_edge(EdgeOrIter e, undirected_graph_helper& g_) ^ ./boost/graph/detail/adjacency_list.hpp:1247:5: note: candidate function template not viable: requires 2 arguments, but 3 were provided remove_edge(EdgeOrIter e, ^ fatal error: too many errors emitted, stopping now [-ferror-limit=] 20 errors generated. make: *** [PathRanker.o] Error 1 ERROR: compilation failed for package ‘NetPathMiner’ * removing ‘/Library/Frameworks/R.framework/Versions/4.3-x86_64/Resources/library/NetPathMiner’