Back to Build/check report for BioC 3.16 experimental data
A[B]CDEFGHIJKLMNOPQRSTUVWXYZ

This page was generated on 2023-04-11 14:50:26 -0400 (Tue, 11 Apr 2023).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 20.04.5 LTS)x86_644.2.3 (2023-03-15) -- "Shortstop Beagle" 4502
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

BUILD results for BioPlex on nebbiolo2


To the developers/maintainers of the BioPlex package:
Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 28/416HostnameOS / ArchINSTALLBUILDCHECK
BioPlex 1.4.4  (landing page)
Ludwig Geistlinger
Snapshot Date: 2023-04-11 07:30:01 -0400 (Tue, 11 Apr 2023)
git_url: https://git.bioconductor.org/packages/BioPlex
git_branch: RELEASE_3_16
git_last_commit: cf57630
git_last_commit_date: 2023-04-07 12:13:15 -0400 (Fri, 07 Apr 2023)
nebbiolo2Linux (Ubuntu 20.04.5 LTS) / x86_64  OK    ERROR  skipped

Summary

Package: BioPlex
Version: 1.4.4
Command: /home/biocbuild/bbs-3.16-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data BioPlex
StartedAt: 2023-04-11 10:19:17 -0400 (Tue, 11 Apr 2023)
EndedAt: 2023-04-11 10:30:43 -0400 (Tue, 11 Apr 2023)
EllapsedTime: 686.3 seconds
RetCode: 1
Status:   ERROR  
PackageFile: None
PackageFileSize: NA

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   /home/biocbuild/bbs-3.16-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data BioPlex
###
##############################################################################
##############################################################################


* checking for file ‘BioPlex/DESCRIPTION’ ... OK
* preparing ‘BioPlex’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building ‘BasicChecks.Rmd’ using rmarkdown
Quitting from lines 61-62 (BasicChecks.Rmd) 
Error: processing vignette 'BasicChecks.Rmd' failed with diagnostics:
download failed; see warnings()
--- failed re-building ‘BasicChecks.Rmd’

--- re-building ‘BioPlex.Rmd’ using rmarkdown
Quitting from lines 178-182 (BioPlex.Rmd) 
Error: processing vignette 'BioPlex.Rmd' failed with diagnostics:
download failed; see warnings()
--- failed re-building ‘BioPlex.Rmd’

SUMMARY: processing the following files failed:
  ‘BasicChecks.Rmd’ ‘BioPlex.Rmd’

Error: Vignette re-building failed.
Execution halted