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### Running command:
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###   /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data OncoSimulR
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* checking for file ‘OncoSimulR/DESCRIPTION’ ... OK
* preparing ‘OncoSimulR’:
* checking DESCRIPTION meta-information ... OK
* cleaning src
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building ‘OncoSimulR.Rmd’ using rmarkdown
Warning: ggrepel: 12 unlabeled data points (too many overlaps). Consider increasing max.overlaps
Loading required package: BiocGenerics

Attaching package: 'BiocGenerics'

The following objects are masked from 'package:stats':

    IQR, mad, sd, var, xtabs

The following objects are masked from 'package:base':

    Filter, Find, Map, Position, Reduce, anyDuplicated,
    append, as.data.frame, basename, cbind, colnames, dirname,
    do.call, duplicated, eval, evalq, get, grep, grepl,
    intersect, is.unsorted, lapply, mapply, match, mget,
    order, paste, pmax, pmax.int, pmin, pmin.int, rank, rbind,
    rownames, sapply, setdiff, sort, table, tapply, union,
    unique, unsplit, which.max, which.min


Attaching package: 'igraph'

The following objects are masked from 'package:graph':

    degree, edges, intersection, union

The following objects are masked from 'package:BiocGenerics':

    normalize, path, union

The following objects are masked from 'package:stats':

    decompose, spectrum

The following object is masked from 'package:base':

    union

Warning: ggrepel: 103 unlabeled data points (too many overlaps). Consider increasing max.overlaps
Warning: ggrepel: 7 unlabeled data points (too many overlaps). Consider increasing max.overlaps
Warning: ggrepel: 20 unlabeled data points (too many overlaps). Consider increasing max.overlaps
frequencyType set to 'auto'
All single-gene genotypes as input to to_genotFitness_std
Using old version of fitnessEffects. Transforming fitnessEffects
            to last version.
Using old version of fitnessEffects. Transforming fitnessEffects
            to last version.
frequencyType set to 'auto'
All single-gene genotypes as input to to_genotFitness_std
Using old version of fitnessEffects. Transforming fitnessEffects
            to last version.
Using old version of fitnessEffects. Transforming fitnessEffects
            to last version.
frequencyType set to 'auto'
All single-gene genotypes as input to to_genotFitness_std
frequencyType set to 'auto'
All single-gene genotypes as input to to_genotFitness_std
Using old version of fitnessEffects. Transforming fitnessEffects
            to last version.
Using old version of fitnessEffects. Transforming fitnessEffects
            to last version.
frequencyType set to 'auto'
All single-gene genotypes as input to to_genotFitness_std
Using old version of fitnessEffects. Transforming fitnessEffects
            to last version.
Using old version of fitnessEffects. Transforming fitnessEffects
            to last version.
All single-gene genotypes as input to to_genotFitness_std
Using old version of fitnessEffects. Transforming fitnessEffects
            to last version.
Using old version of fitnessEffects. Transforming fitnessEffects
            to last version.
frequencyType set to 'auto'
All single-gene genotypes as input to to_genotFitness_std
Using old version of fitnessEffects. Transforming fitnessEffects
            to last version.
Using old version of fitnessEffects. Transforming fitnessEffects
            to last version.
All single-gene genotypes as input to to_genotFitness_std
Using old version of fitnessEffects. Transforming fitnessEffects
            to last version.
Using old version of fitnessEffects. Transforming fitnessEffects
            to last version.
All single-gene genotypes as input to to_genotFitness_std
Using old version of fitnessEffects. Transforming fitnessEffects
            to last version.
Using old version of fitnessEffects. Transforming fitnessEffects
            to last version.
Using old version of fitnessEffects. Transforming fitnessEffects
            to last version.
Using old version of fitnessEffects. Transforming fitnessEffects
            to last version.
Using old version of fitnessEffects. Transforming fitnessEffects
            to last version.
Using old version of fitnessEffects. Transforming fitnessEffects
            to last version.
All single-gene genotypes as input to to_genotFitness_std
Using old version of fitnessEffects. Transforming fitnessEffects
            to last version.
Using old version of fitnessEffects. Transforming fitnessEffects
            to last version.
Using old version of fitnessEffects. Transforming fitnessEffects
            to last version.
Using old version of fitnessEffects. Transforming fitnessEffects
            to last version.
Quitting from lines 9785-9825 (OncoSimulR.Rmd) 
Error: processing vignette 'OncoSimulR.Rmd' failed with diagnostics:
'length.out' must be a non-negative number
--- failed re-building ‘OncoSimulR.Rmd’

SUMMARY: processing the following file failed:
  ‘OncoSimulR.Rmd’

Error: Vignette re-building failed.
Execution halted