############################################################################## ############################################################################## ### ### Running command: ### ### rm -rf scHOT.buildbin-libdir && mkdir scHOT.buildbin-libdir && D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL --build --library=scHOT.buildbin-libdir scHOT_1.7.1.tar.gz ### ############################################################################## ############################################################################## * installing *source* package 'scHOT' ... ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'scHOT' finding HTML links ... done MOB_subset html liver html params-set html plotColouredExpression html plotEgoNetwork html plotHigherOrderSequence html plotOrderedExpression html positionColData-set html positionType-set html scHOT-class html scHOT html scHOT_addTestingScaffold html scHOT_buildFromMatrix html scHOT_buildFromSCE html scHOT_calculateGlobalHigherOrderFunction html scHOT_calculateHigherOrderTestStatistics html scHOT_estimatePvalues html scHOT_output-set html scHOT_performPermutationTest html scHOT_plotPermutationDistributions html scHOT_setPermutationScaffold html scHOT_setWeightMatrix html scHOT_stripOutput html spatialWeightMatrix html testingScaffold-set html thin html trajectoryWeightMatrix html weightMatrix-set html weightedPearson html weightedSpearman html weightedVariance html weightedZIKendall html weightedZISpearman html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * MD5 sums packaged installation of 'scHOT' as scHOT_1.7.1.zip * DONE (scHOT)