############################################################################## ############################################################################## ### ### Running command: ### ### D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL miloR ### ############################################################################## ############################################################################## * installing to library 'D:/biocbuild/bbs-3.15-bioc/R/library' * installing *source* package 'miloR' ... ** using staged installation ** R ** data ** byte-compile and prepare package for lazy loading Creating a new generic function for 'graph' in package 'miloR' ** help *** installing help indices converting help for package 'miloR' finding HTML links ... done Milo html finding level-2 HTML links ... done annotateNhoods html buildFromAdjacency html buildGraph html buildNhoodGraph html calcNhoodDistance html calcNhoodExpression html countCells html findNhoodGroupMarkers html findNhoodMarkers html graphSpatialFDR html groupNhoods html makeNhoods html matrixORMatrix-class html methods html miloR-package html plotDAbeeswarm html plotNhoodExpressionDA html plotNhoodGraph html plotNhoodGraphDA html plotNhoodMA html plotNhoodSizeHist html sim_discrete html sim_trajectory html testDiffExp html testNhoods html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (miloR) Making 'packages.html' ... done