############################################################################## ############################################################################## ### ### Running command: ### ### D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL easier ### ############################################################################## ############################################################################## * installing to library 'D:/biocbuild/bbs-3.15-bioc/R/library' * installing *source* package 'easier' ... ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'easier' finding HTML links ... done assess_immune_response html calc_z_score html categorize_TMB html compute_Ayers_expIS html compute_CC_pairs html compute_CCpair_score html compute_CYT html compute_Davoli_IS html compute_IFNy html compute_IMPRES_MSI html compute_LR_pairs html compute_RIR html compute_Roh_IS html compute_TF_activity html compute_TLS html compute_Tcell_inflamed html compute_cell_fractions html compute_chemokines html compute_pathway_activity html compute_scores_immune_response html easier-pkg html explore_biomarkers html get_OE_bulk html get_semi_random_OE html predict_immune_response html predict_with_rmtlr html reannotate_genes html retrieve_easier_score html rmtlr_test html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (easier) Making 'packages.html' ... done