############################################################################## ############################################################################## ### ### Running command: ### ### D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL PAIRADISE ### ############################################################################## ############################################################################## * installing to library 'D:/biocbuild/bbs-3.15-bioc/R/library' * installing *source* package 'PAIRADISE' ... ** using staged installation ** R ** data ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'PAIRADISE' finding HTML links ... done PAIRADISE html PDseDataSet html PDseDataSetFromMat html clean.data html counts html load.data html logit html loglikelihood html optimize1 html optimize2 html pairadise-FUN html REDIRECT:topic Previous alias or file overwritten by alias: D:/biocbuild/bbs-3.15-bioc/R/library/00LOCK-PAIRADISE/00new/PAIRADISE/help/pairadise.html results html sample_dataset html sigmoid html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (PAIRADISE) Making 'packages.html' ...Warning in packageDescription(i, lib.loc = lib, fields = "Title", encoding = "UTF-8") : DESCRIPTION file of package 'SpatialExperiment' is missing or broken done