############################################################################## ############################################################################## ### ### Running command: ### ### D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL HELP ### ############################################################################## ############################################################################## * installing to library 'D:/biocbuild/bbs-3.15-bioc/R/library' * installing *source* package 'HELP' ... ** using staged installation ** R ** data ** demo ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'HELP' finding HTML links ... done base.stacking.thermodynamics html calcGC-methods html calcGC html calcPrototype-methods html calcPrototype html calcTm-methods html calcTm html combineData-methods html combineData html createWiggle-methods html createWiggle html exprs2-methods html exprs2 html fuzzyMatches-methods html fuzzyMatches html getFeatures-methods html getFeatures html getSamples-methods html getSamples html plotBins-methods html plotBins html plotChip-methods html plotChip html plotFeature-methods html plotFeature html plotPairs-methods html plotPairs html quantileNormalize-methods html quantileNormalize html readDesign-methods html readDesign html readPairs-methods html readPairs html readSampleKey html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (HELP) Making 'packages.html' ...Warning in packageDescription(i, lib.loc = lib, fields = "Title", encoding = "UTF-8") : DESCRIPTION file of package 'twilight' is missing or broken done