Back to Multiple platform build/check report for BioC 3.15
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This page was generated on 2022-03-18 11:07:03 -0400 (Fri, 18 Mar 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo1Linux (Ubuntu 20.04.4 LTS)x86_64R Under development (unstable) (2022-02-17 r81757) -- "Unsuffered Consequences" 4334
riesling1Windows Server 2019 Standardx64R Under development (unstable) (2021-11-21 r81221) -- "Unsuffered Consequences" 4097
palomino3Windows Server 2022 Datacenterx64R Under development (unstable) (2022-02-17 r81757 ucrt) -- "Unsuffered Consequences" 4083
merida1macOS 10.14.6 Mojavex86_64R Under development (unstable) (2022-03-02 r81842) -- "Unsuffered Consequences" 4134
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

BUILD BIN results for BioMM on riesling1


To the developers/maintainers of the BioMM package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/BioMM.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 182/2090HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
BioMM 1.11.0  (landing page)
Junfang Chen
Snapshot Date: 2022-03-17 13:55:23 -0400 (Thu, 17 Mar 2022)
git_url: https://git.bioconductor.org/packages/BioMM
git_branch: master
git_last_commit: bf4689d
git_last_commit_date: 2021-10-26 12:49:29 -0400 (Tue, 26 Oct 2021)
nebbiolo1Linux (Ubuntu 20.04.4 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
riesling1Windows Server 2019 Standard / x64  OK    OK    OK    OK  
palomino3Windows Server 2022 Datacenter / x64  OK    OK    OK    OK  NO, package depends on 'topGO' which is not available
merida1macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: BioMM
Version: 1.11.0
Command: rm -rf BioMM.buildbin-libdir && mkdir BioMM.buildbin-libdir && D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL --build --library=BioMM.buildbin-libdir BioMM_1.11.0.tar.gz
StartedAt: 2022-03-17 20:55:59 -0400 (Thu, 17 Mar 2022)
EndedAt: 2022-03-17 20:57:17 -0400 (Thu, 17 Mar 2022)
EllapsedTime: 78.3 seconds
RetCode: 0
Status:   OK  
PackageFile: BioMM_1.11.0.zip
PackageFileSize: 2.953 MiB

Command output

##############################################################################
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###
### Running command:
###
###   rm -rf BioMM.buildbin-libdir && mkdir BioMM.buildbin-libdir && D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL --build --library=BioMM.buildbin-libdir BioMM_1.11.0.tar.gz
###
##############################################################################
##############################################################################


* installing *source* package 'BioMM' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'BioMM'
    finding HTML links ... done
    BioMM                                   html  
    BioMMstage2pred                         html  
    baseGLMnet                              html  
    baseModel                               html  
    baseRandForest                          html  
    baseSVM                                 html  
    cirPlot4pathway                         html  
    classifiACC                             html  
    getDataByFilter                         html  
    getMetrics                              html  
    omics2pathlist                          html  
    plotRankedFeature                       html  
    plotVarExplained                        html  
    predByBS                                html  
    predByCV                                html  
    predByFS                                html  
    reconBySupervised                       html  
    reconByUnsupervised                     html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* MD5 sums
packaged installation of 'BioMM' as BioMM_1.11.0.zip
* DONE (BioMM)