Back to Workflows build report for BioC 3.14

This page was generated on 2022-04-11 21:00:10 -0400 (Mon, 11 Apr 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 20.04.4 LTS)x86_644.1.3 (2022-03-10) -- "One Push-Up" 4323
riesling1Windows Server 2019 Standardx644.1.2 (2021-11-01) -- "Bird Hippie" 4108
machv2macOS 10.14.6 Mojavex86_644.1.3 (2022-03-10) -- "One Push-Up" 4136
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

INSTALL results for rnaseqDTU on riesling1


To the developers/maintainers of the rnaseqDTU package:
Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 22/29HostnameOS / ArchINSTALLBUILD
rnaseqDTU 1.14.0  (landing page)
Michael Love
Snapshot Date: 2022-04-11 14:45:01 -0400 (Mon, 11 Apr 2022)
git_url: https://git.bioconductor.org/packages/rnaseqDTU
git_branch: RELEASE_3_14
git_last_commit: a33d979
git_last_commit_date: 2021-10-26 11:16:28 -0400 (Tue, 26 Oct 2021)
nebbiolo2Linux (Ubuntu 20.04.4 LTS) / x86_64  OK    OK  UNNEEDED, same version is already published
riesling1Windows Server 2019 Standard / x64  OK    OK  
machv2macOS 10.14.6 Mojave / x86_64  OK    OK  

Summary

Package: rnaseqDTU
Version: 1.14.0
Command: C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/workflows/src/contrib/rnaseqDTU_1.14.0.tar.gz && rm -rf rnaseqDTU.buildbin-libdir && mkdir rnaseqDTU.buildbin-libdir && D:\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=rnaseqDTU.buildbin-libdir rnaseqDTU_1.14.0.tar.gz && D:\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL rnaseqDTU_1.14.0.zip && rm rnaseqDTU_1.14.0.tar.gz rnaseqDTU_1.14.0.zip
StartedAt: 2022-04-11 15:00:43 -0400 (Mon, 11 Apr 2022)
EndedAt: 2022-04-11 15:01:55 -0400 (Mon, 11 Apr 2022)
EllapsedTime: 71.8 seconds
RetCode: 0
Status:   OK  

Command output

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/workflows/src/contrib/rnaseqDTU_1.14.0.tar.gz && rm -rf rnaseqDTU.buildbin-libdir && mkdir rnaseqDTU.buildbin-libdir && D:\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=rnaseqDTU.buildbin-libdir rnaseqDTU_1.14.0.tar.gz && D:\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL rnaseqDTU_1.14.0.zip && rm rnaseqDTU_1.14.0.tar.gz rnaseqDTU_1.14.0.zip
###
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install for i386

* installing *source* package 'rnaseqDTU' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'rnaseqDTU'
    finding HTML links ... done
    cts                                     html  
    dge.genes                               html  
    disps                                   html  
    dte.genes                               html  
    dtu.genes                               html  
    dxr                                     html  
    dxr.g                                   html  
    fold_changes                            html  
    frag_GC_bias                            html  
    iso.dge                                 html  
    iso.dte                                 html  
    iso.dte.only                            html  
    iso.dtu                                 html  
    res                                     html  
    res.txp                                 html  
    sim.counts.mat                          html  
    sim_counts                              html  
    tpms                                    html  
    txdf                                    html  
    txi.g                                   html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'rnaseqDTU' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'rnaseqDTU' as rnaseqDTU_1.14.0.zip
* DONE (rnaseqDTU)
* installing to library 'D:/biocbuild/bbs-3.14-bioc/R/library'
package 'rnaseqDTU' successfully unpacked and MD5 sums checked