##############################################################################
##############################################################################
###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/workflows/src/contrib/TCGAWorkflow_1.18.1.tar.gz && rm -rf TCGAWorkflow.buildbin-libdir && mkdir TCGAWorkflow.buildbin-libdir && D:\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=TCGAWorkflow.buildbin-libdir TCGAWorkflow_1.18.1.tar.gz && D:\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL TCGAWorkflow_1.18.1.zip && rm TCGAWorkflow_1.18.1.tar.gz TCGAWorkflow_1.18.1.zip
###
##############################################################################
##############################################################################


  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
100  204k  100  204k    0     0   391k      0 --:--:-- --:--:-- --:--:--  391k

install for i386

* installing *source* package 'TCGAWorkflow' ...
** using staged installation
** R
** byte-compile and prepare package for lazy loading
Warning: replacing previous import 'SummarizedExperiment::as.data.frame' by 'motifStack::as.data.frame' when loading 'TCGAWorkflow'
** help
*** installing help indices
  converting help for package 'TCGAWorkflow'
    finding HTML links ... done
    TCGAWorkflow                            html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
Warning: replacing previous import 'SummarizedExperiment::as.data.frame' by 'motifStack::as.data.frame' when loading 'TCGAWorkflow'
** testing if installed package can be loaded from final location
Warning: replacing previous import 'SummarizedExperiment::as.data.frame' by 'motifStack::as.data.frame' when loading 'TCGAWorkflow'
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'TCGAWorkflow' ...
** testing if installed package can be loaded
Warning: replacing previous import 'SummarizedExperiment::as.data.frame' by 'motifStack::as.data.frame' when loading 'TCGAWorkflow'
* MD5 sums
packaged installation of 'TCGAWorkflow' as TCGAWorkflow_1.18.1.zip
* DONE (TCGAWorkflow)
* installing to library 'D:/biocbuild/bbs-3.14-bioc/R/library'
package 'TCGAWorkflow' successfully unpacked and MD5 sums checked