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This page was generated on 2022-01-19 06:00:08 -0500 (Wed, 19 Jan 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 20.04.4 LTS)x86_644.1.2 (2021-11-01) -- "Bird Hippie" 4328
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

CHECK results for AHPathbankDbs on nebbiolo2


To the developers/maintainers of the AHPathbankDbs package:
Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 5/33HostnameOS / ArchINSTALLBUILDCHECK
AHPathbankDbs 0.99.5  (landing page)
Kozo Nishida
Snapshot Date: 2022-01-19 02:30:01 -0500 (Wed, 19 Jan 2022)
git_url: https://git.bioconductor.org/packages/AHPathbankDbs
git_branch: master
git_last_commit: a90bfd4
git_last_commit_date: 2021-04-16 02:43:59 -0500 (Fri, 16 Apr 2021)
nebbiolo2Linux (Ubuntu 20.04.4 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: AHPathbankDbs
Version: 0.99.5
Command: /home/biocbuild/bbs-3.14-bioc/R/bin/R CMD check --install=check:AHPathbankDbs.install-out.txt --library=/home/biocbuild/bbs-3.14-bioc/R/library --no-vignettes --timings AHPathbankDbs_0.99.5.tar.gz
StartedAt: 2022-01-19 03:02:22 -0500 (Wed, 19 Jan 2022)
EndedAt: 2022-01-19 03:02:47 -0500 (Wed, 19 Jan 2022)
EllapsedTime: 24.9 seconds
RetCode: 0
Status:   OK  
CheckDir: AHPathbankDbs.Rcheck
Warnings: 0

Command output

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### Running command:
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###   /home/biocbuild/bbs-3.14-bioc/R/bin/R CMD check --install=check:AHPathbankDbs.install-out.txt --library=/home/biocbuild/bbs-3.14-bioc/R/library --no-vignettes --timings AHPathbankDbs_0.99.5.tar.gz
###
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* using log directory ‘/home/biocbuild/bbs-3.14-data-annotation/meat/AHPathbankDbs.Rcheck’
* using R version 4.1.2 (2021-11-01)
* using platform: x86_64-pc-linux-gnu (64-bit)
* using session charset: UTF-8
* using option ‘--no-vignettes’
* checking for file ‘AHPathbankDbs/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘AHPathbankDbs’ version ‘0.99.5’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘AHPathbankDbs’ can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking files in ‘vignettes’ ... OK
* checking examples ... NONE
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in ‘inst/doc’ ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignette outputs ... SKIPPED
* checking PDF version of manual ... OK
* DONE

Status: OK


Installation output

AHPathbankDbs.Rcheck/00install.out

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### Running command:
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###   /home/biocbuild/bbs-3.14-bioc/R/bin/R CMD INSTALL AHPathbankDbs
###
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* installing to library ‘/home/biocbuild/bbs-3.14-bioc/R/library’
* installing *source* package ‘AHPathbankDbs’ ...
** using staged installation
** inst
** help
No man pages found in package  ‘AHPathbankDbs’ 
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (AHPathbankDbs)

Tests output


Example timings