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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/strandCheckR_1.12.0.tar.gz && rm -rf strandCheckR.buildbin-libdir && mkdir strandCheckR.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=strandCheckR.buildbin-libdir strandCheckR_1.12.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL strandCheckR_1.12.0.zip && rm strandCheckR_1.12.0.tar.gz strandCheckR_1.12.0.zip
###
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  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
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  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
  0  766k    0  5189    0     0  62955      0  0:00:12 --:--:--  0:00:12 62518
100  766k  100  766k    0     0   933k      0 --:--:-- --:--:-- --:--:--  933k

install for i386

* installing *source* package 'strandCheckR' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'strandCheckR'
    finding HTML links ... done
    checkPairedEnd                          html  
    dot-calculateStrandCoverage             html  
    dot-calculateStrandNbReads              html  
    dot-concatenateAlignments               html  
    dot-getWinInSequence                    html  
    dot-keptProbaWin                        html  
    dot-keptReadFragment                    html  
    dot-sequenceInfoInPartition             html  
    dot-summarizeHist                       html  
    filterDNA                               html  
    getStrandFromBamFile                    html  
    getStrandFromReadInfo                   html  
    finding level-2 HTML links ... done

    getWinOverlapEachIRange                 html  
    getWinOverlapEachReadFragment           html  
    getWinOverlapGRanges                    html  
    intersectWithFeature                    html  
    plotHist                                html  
    plotWin                                 html  
    strandCheckR-package                    html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'strandCheckR' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'strandCheckR' as strandCheckR_1.12.0.zip
* DONE (strandCheckR)
* installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library'
package 'strandCheckR' successfully unpacked and MD5 sums checked