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### Running command:
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###   C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD check --force-multiarch --install=check:regutools.install-out.txt --library=C:\Users\biocbuild\bbs-3.14-bioc\R\library --no-vignettes --timings regutools_1.6.0.tar.gz
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* using log directory 'C:/Users/biocbuild/bbs-3.14-bioc/meat/regutools.Rcheck'
* using R version 4.1.3 (2022-03-10)
* using platform: x86_64-w64-mingw32 (64-bit)
* using session charset: ISO8859-1
* using option '--no-vignettes'
* checking for file 'regutools/DESCRIPTION' ... OK
* this is package 'regutools' version '1.6.0'
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking whether package 'regutools' can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking 'build' directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* loading checks for arch 'i386'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
* loading checks for arch 'x64'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking files in 'vignettes' ... OK
* checking examples ...
** running examples for arch 'i386' ... OK
Examples with CPU (user + system) or elapsed time > 5s
                        user system elapsed
plot_dna_objects       12.80   0.48   13.67
build_condition        10.59   1.50   13.11
get_dna_objects        10.47   0.33   11.36
connect_database        7.99   1.68   10.05
convert_to_biostrings   8.60   1.00   14.73
get_gene_synonyms       8.94   0.40    9.69
regulondb               8.22   1.06    9.64
get_binding_sites       8.48   0.43    9.56
get_dataset             8.22   0.62    9.25
convert_to_granges      8.23   0.53    9.16
get_regulatory_network  8.29   0.30   10.17
guess_id                7.94   0.61    8.93
list_attributes         7.80   0.71    8.86
list_datasets           7.92   0.53    8.83
get_regulatory_summary  7.89   0.42    8.69
get_gene_regulators     7.66   0.36    8.53
** running examples for arch 'x64' ... OK
Examples with CPU (user + system) or elapsed time > 5s
                        user system elapsed
plot_dna_objects       12.81   0.37   13.57
build_condition         9.22   0.40   10.28
connect_database        9.14   0.35    9.88
convert_to_biostrings   8.21   0.45    9.02
get_regulatory_summary  8.33   0.31    8.98
get_dataset             8.04   0.45    8.84
get_binding_sites       7.90   0.54    8.79
convert_to_granges      7.99   0.45    8.83
list_datasets           8.03   0.41    8.83
get_gene_synonyms       7.98   0.31    8.68
guess_id                7.86   0.36    8.59
list_attributes         7.87   0.23    8.49
regulondb               7.68   0.38    8.41
get_dna_objects         7.77   0.25    8.39
get_gene_regulators     7.58   0.39    8.34
get_regulatory_network  7.44   0.38    9.39
* checking for unstated dependencies in 'tests' ... OK
* checking tests ...
** running tests for arch 'i386' ...
  Running 'testthat.R'
 OK
** running tests for arch 'x64' ...
  Running 'testthat.R'
 OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in 'inst/doc' ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignette outputs ... SKIPPED
* checking PDF version of manual ... OK
* DONE

Status: OK