############################################################################## ############################################################################## ### ### Running command: ### ### C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/qPLEXanalyzer_1.12.1.tar.gz && rm -rf qPLEXanalyzer.buildbin-libdir && mkdir qPLEXanalyzer.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=qPLEXanalyzer.buildbin-libdir qPLEXanalyzer_1.12.1.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL qPLEXanalyzer_1.12.1.zip && rm qPLEXanalyzer_1.12.1.tar.gz qPLEXanalyzer_1.12.1.zip ### ############################################################################## ############################################################################## % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 15 3893k 15 615k 0 0 996k 0 0:00:03 --:--:-- 0:00:03 995k 65 3893k 65 2536k 0 0 1566k 0 0:00:02 0:00:01 0:00:01 1566k 100 3893k 100 3893k 0 0 1822k 0 0:00:02 0:00:02 --:--:-- 1823k install for i386 * installing *source* package 'qPLEXanalyzer' ... ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading Note: wrong number of arguments to '==' Note: wrong number of arguments to '==' ** help *** installing help indices converting help for package 'qPLEXanalyzer' finding HTML links ... done ER_ARID1A_KO_MCF7 html IRSnorm html finding level-2 HTML links ... done assignColours html computeDiffStats html convertToMSnset html corrPlot html coveragePlot html exp2_Xlink html exp3_OHT_ESR1 html getContrastResults html groupScaling html hierarchicalPlot html human_anno html intensityBoxplot html intensityPlot html maVolPlot html mergePeptides html mouse_anno html normalizeQuantiles html normalizeScaling html pcaPlot html peptideIntensityPlot html plotMeanVar html qPLEXanalyzer-package html regressIntensity html rliPlot html rowScaling html summarizeIntensities html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'qPLEXanalyzer' ... ** testing if installed package can be loaded * MD5 sums packaged installation of 'qPLEXanalyzer' as qPLEXanalyzer_1.12.1.zip * DONE (qPLEXanalyzer) * installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library' package 'qPLEXanalyzer' successfully unpacked and MD5 sums checked