Back to Multiple platform build/check report for BioC 3.14
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This page was generated on 2022-04-13 12:07:00 -0400 (Wed, 13 Apr 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 20.04.4 LTS)x86_644.1.3 (2022-03-10) -- "One Push-Up" 4324
tokay2Windows Server 2012 R2 Standardx644.1.3 (2022-03-10) -- "One Push-Up" 4077
machv2macOS 10.14.6 Mojavex86_644.1.3 (2022-03-10) -- "One Push-Up" 4137
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

BUILD BIN results for netSmooth on tokay2


To the developers/maintainers of the netSmooth package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/netSmooth.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 1291/2083HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
netSmooth 1.14.0  (landing page)
Jonathan Ronen
Snapshot Date: 2022-04-12 01:55:07 -0400 (Tue, 12 Apr 2022)
git_url: https://git.bioconductor.org/packages/netSmooth
git_branch: RELEASE_3_14
git_last_commit: 1cbeacd
git_last_commit_date: 2021-10-26 12:44:44 -0400 (Tue, 26 Oct 2021)
nebbiolo2Linux (Ubuntu 20.04.4 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
tokay2Windows Server 2012 R2 Standard / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
machv2macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  NO, package depends on 'clusterExperiment' which is not available

Summary

Package: netSmooth
Version: 1.14.0
Command: rm -rf netSmooth.buildbin-libdir && mkdir netSmooth.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=netSmooth.buildbin-libdir netSmooth_1.14.0.tar.gz
StartedAt: 2022-04-13 06:42:56 -0400 (Wed, 13 Apr 2022)
EndedAt: 2022-04-13 06:44:20 -0400 (Wed, 13 Apr 2022)
EllapsedTime: 83.6 seconds
RetCode: 0
Status:   OK  
PackageFile: netSmooth_1.14.0.zip
PackageFileSize: 4.181 MiB

Command output

##############################################################################
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###
### Running command:
###
###   rm -rf netSmooth.buildbin-libdir && mkdir netSmooth.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=netSmooth.buildbin-libdir netSmooth_1.14.0.tar.gz
###
##############################################################################
##############################################################################



install for i386

* installing *source* package 'netSmooth' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'netSmooth'
    finding HTML links ... done
    calc2DEntropy                           html  
    clusterExperimentWorkflow               html  
    clusterOne                              html  
    dimReduce                               html  
    human.ppi                               html  
    l1NormalizeColumns                      html  
    l1NormalizeRows                         html  
    mouse.ppi                               html  
    netSmooth                               html  
REDIRECT:topic	 Previous alias or file overwritten by alias: C:/Users/biocbuild/bbs-3.14-bioc/meat/netSmooth.buildbin-libdir/00LOCK-netSmooth/00new/netSmooth/help/netSmooth+2CMatrix-method.html
    pickDimReduction                        html  
REDIRECT:topic	 Previous alias or file overwritten by alias: C:/Users/biocbuild/bbs-3.14-bioc/meat/netSmooth.buildbin-libdir/00LOCK-netSmooth/00new/netSmooth/help/pickDimReduction+2CMatrix-method.html
    projectFromNetworkRecombine-matrix-method
                                            html  
    projectOnNetwork                        html  
    randomWalkByIterations                  html  
    randomWalkByMatrixInv-matrix-method     html  
    randomWalkBySolve-matrix-method         html  
    robustClusters                          html  
    scoreSmoothing                          html  
    smallPPI                                html  
    smallscRNAseq                           html  
    smoothAndRecombine-matrix-method        html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'netSmooth' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'netSmooth' as netSmooth_1.14.0.zip
* DONE (netSmooth)