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This page was generated on 2022-04-13 12:05:38 -0400 (Wed, 13 Apr 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 20.04.4 LTS)x86_644.1.3 (2022-03-10) -- "One Push-Up" 4324
tokay2Windows Server 2012 R2 Standardx644.1.3 (2022-03-10) -- "One Push-Up" 4077
machv2macOS 10.14.6 Mojavex86_644.1.3 (2022-03-10) -- "One Push-Up" 4137
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

CHECK results for mnem on nebbiolo2


To the developers/maintainers of the mnem package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/mnem.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 1185/2083HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
mnem 1.10.0  (landing page)
Martin Pirkl
Snapshot Date: 2022-04-12 01:55:07 -0400 (Tue, 12 Apr 2022)
git_url: https://git.bioconductor.org/packages/mnem
git_branch: RELEASE_3_14
git_last_commit: 6b5bed1
git_last_commit_date: 2021-10-26 12:52:22 -0400 (Tue, 26 Oct 2021)
nebbiolo2Linux (Ubuntu 20.04.4 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
tokay2Windows Server 2012 R2 Standard / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
machv2macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: mnem
Version: 1.10.0
Command: /home/biocbuild/bbs-3.14-bioc/R/bin/R CMD check --install=check:mnem.install-out.txt --library=/home/biocbuild/bbs-3.14-bioc/R/library --no-vignettes --timings mnem_1.10.0.tar.gz
StartedAt: 2022-04-12 08:17:58 -0400 (Tue, 12 Apr 2022)
EndedAt: 2022-04-12 08:19:44 -0400 (Tue, 12 Apr 2022)
EllapsedTime: 105.3 seconds
RetCode: 0
Status:   OK  
CheckDir: mnem.Rcheck
Warnings: 0

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   /home/biocbuild/bbs-3.14-bioc/R/bin/R CMD check --install=check:mnem.install-out.txt --library=/home/biocbuild/bbs-3.14-bioc/R/library --no-vignettes --timings mnem_1.10.0.tar.gz
###
##############################################################################
##############################################################################


* using log directory ‘/home/biocbuild/bbs-3.14-bioc/meat/mnem.Rcheck’
* using R version 4.1.3 (2022-03-10)
* using platform: x86_64-pc-linux-gnu (64-bit)
* using session charset: UTF-8
* using option ‘--no-vignettes’
* checking for file ‘mnem/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘mnem’ version ‘1.10.0’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘mnem’ can be installed ... OK
* checking installed package size ... NOTE
  installed size is  5.7Mb
  sub-directories of 1Mb or more:
    data   2.3Mb
    libs   3.0Mb
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... NOTE
createApp: no visible binding for global variable ‘..tmp’
Undefined global functions or variables:
  ..tmp
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of ‘data’ directory ... OK
* checking data for non-ASCII characters ... OK
* checking LazyData ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking compiled code ... NOTE
Note: information on .o files is not available
* checking files in ‘vignettes’ ... OK
* checking examples ... OK
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
  Running ‘runTests.R’
 OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in ‘inst/doc’ ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignette outputs ... SKIPPED
* checking PDF version of manual ... OK
* DONE

Status: 3 NOTEs
See
  ‘/home/biocbuild/bbs-3.14-bioc/meat/mnem.Rcheck/00check.log’
for details.



Installation output

mnem.Rcheck/00install.out

##############################################################################
##############################################################################
###
### Running command:
###
###   /home/biocbuild/bbs-3.14-bioc/R/bin/R CMD INSTALL mnem
###
##############################################################################
##############################################################################


* installing to library ‘/home/biocbuild/bbs-3.14-bioc/R/library’
* installing *source* package ‘mnem’ ...
** using staged installation
** libs
g++ -std=gnu++14 -I"/home/biocbuild/bbs-3.14-bioc/R/include" -DNDEBUG  -I'/home/biocbuild/bbs-3.14-bioc/R/library/Rcpp/include' -I'/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include' -I/usr/local/include   -fpic  -g -O2  -Wall -c RcppExports.cpp -o RcppExports.o
In file included from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Core:397,
                 from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
                 from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
                 from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
                 from RcppExports.cpp:4:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:60:39: warning: ignoring attributes on template argument ‘__m128’ {aka ‘__vector(4) float’} [-Wignored-attributes]
   60 | template<> struct is_arithmetic<__m128>  { enum { value = true }; };
      |                                       ^
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:61:40: warning: ignoring attributes on template argument ‘__m128i’ {aka ‘__vector(2) long long int’} [-Wignored-attributes]
   61 | template<> struct is_arithmetic<__m128i> { enum { value = true }; };
      |                                        ^
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:62:40: warning: ignoring attributes on template argument ‘__m128d’ {aka ‘__vector(2) double’} [-Wignored-attributes]
   62 | template<> struct is_arithmetic<__m128d> { enum { value = true }; };
      |                                        ^
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:161:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__vector(4) float’} [-Wignored-attributes]
  161 | template<> struct unpacket_traits<Packet4f> { typedef float  type; enum {size=4, alignment=Aligned16}; typedef Packet4f half; };
      |                                           ^
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:162:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__vector(2) double’} [-Wignored-attributes]
  162 | template<> struct unpacket_traits<Packet2d> { typedef double type; enum {size=2, alignment=Aligned16}; typedef Packet2d half; };
      |                                           ^
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:163:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4i’ {aka ‘__vector(2) long long int’} [-Wignored-attributes]
  163 | template<> struct unpacket_traits<Packet4i> { typedef int    type; enum {size=4, alignment=Aligned16}; typedef Packet4i half; };
      |                                           ^
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:718:35: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__vector(4) float’} [-Wignored-attributes]
  718 | struct palign_impl<Offset,Packet4f>
      |                                   ^
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:741:35: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4i’ {aka ‘__vector(2) long long int’} [-Wignored-attributes]
  741 | struct palign_impl<Offset,Packet4i>
      |                                   ^
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:764:35: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__vector(2) double’} [-Wignored-attributes]
  764 | struct palign_impl<Offset,Packet2d>
      |                                   ^
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:778:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__vector(4) float’} [-Wignored-attributes]
  778 | ptranspose(PacketBlock<Packet4f,4>& kernel) {
      |                                  ^
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:783:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__vector(2) double’} [-Wignored-attributes]
  783 | ptranspose(PacketBlock<Packet2d,2>& kernel) {
      |                                  ^
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:790:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4i’ {aka ‘__vector(2) long long int’} [-Wignored-attributes]
  790 | ptranspose(PacketBlock<Packet4i,4>& kernel) {
      |                                  ^
In file included from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Core:377,
                 from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
                 from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
                 from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
                 from RcppExports.cpp:4:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:15:70: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__vector(4) float’} [-Wignored-attributes]
   15 |   template<> struct conj_helper<PACKET_REAL, PACKET_CPLX, false,false> {                                          \
      |                                                                      ^
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:232:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’
  232 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f)
      | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:22:70: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__vector(4) float’} [-Wignored-attributes]
   22 |   template<> struct conj_helper<PACKET_CPLX, PACKET_REAL, false,false> {                                          \
      |                                                                      ^
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:232:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’
  232 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f)
      | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:15:70: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__vector(2) double’} [-Wignored-attributes]
   15 |   template<> struct conj_helper<PACKET_REAL, PACKET_CPLX, false,false> {                                          \
      |                                                                      ^
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:417:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’
  417 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d)
      | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:22:70: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__vector(2) double’} [-Wignored-attributes]
   22 |   template<> struct conj_helper<PACKET_CPLX, PACKET_REAL, false,false> {                                          \
      |                                                                      ^
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:417:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’
  417 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d)
      | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Core:370,
                 from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
                 from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
                 from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
                 from RcppExports.cpp:4:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet<float, 4>’:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57:   required from ‘struct Eigen::internal::traits<Eigen::Matrix<float, 4, 1> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:242:7:   required from ‘struct Eigen::internal::traits<Eigen::Quaternion<float> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SSE.h:24:46:   required from here
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__vector(4) float’} [-Wignored-attributes]
  187 |          bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
      |                                       ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__vector(4) float’} [-Wignored-attributes]
  187 |          bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
      |                      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__vector(4) float’} [-Wignored-attributes]
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(4) float>::half’ {aka ‘__vector(4) float’} [-Wignored-attributes]
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:205:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__vector(4) float’} [-Wignored-attributes]
  205 |   typedef typename find_best_packet_helper<Size,typename packet_traits<T>::type>::type type;
      |                                                                                        ^~~~
In file included from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Core:439,
                 from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
                 from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
                 from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
                 from RcppExports.cpp:4:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<float, 4, 1>, 0>’:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<float, 4, 1>, 1>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<float, 4, 1>, 3>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::Matrix<float, 4, 1> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::Matrix<float, 4, 1> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7:   required from ‘class Eigen::PlainObjectBase<Eigen::Matrix<float, 4, 1> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7:   required from ‘class Eigen::Matrix<float, 4, 1>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50:   required from ‘class Eigen::QuaternionBase<Eigen::Quaternion<float> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:250:7:   required from ‘class Eigen::Quaternion<float>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SSE.h:27:3:   required from here
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__vector(4) float’} [-Wignored-attributes]
   55 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
In file included from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Core:370,
                 from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
                 from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
                 from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
                 from RcppExports.cpp:4:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet<double, 4>’:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57:   required from ‘struct Eigen::internal::traits<Eigen::Matrix<double, 4, 1> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:242:7:   required from ‘struct Eigen::internal::traits<Eigen::Quaternion<double> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SSE.h:88:47:   required from here
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
  187 |          bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
      |                                       ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
  187 |          bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
      |                      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__vector(2) double’} [-Wignored-attributes]
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:205:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
  205 |   typedef typename find_best_packet_helper<Size,typename packet_traits<T>::type>::type type;
      |                                                                                        ^~~~
In file included from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Core:439,
                 from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
                 from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
                 from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
                 from RcppExports.cpp:4:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, 4, 1>, 0>’:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, 4, 1>, 1>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, 4, 1>, 3>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::Matrix<double, 4, 1> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::Matrix<double, 4, 1> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7:   required from ‘class Eigen::PlainObjectBase<Eigen::Matrix<double, 4, 1> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7:   required from ‘class Eigen::Matrix<double, 4, 1>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50:   required from ‘class Eigen::QuaternionBase<Eigen::Quaternion<double> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:250:7:   required from ‘class Eigen::Quaternion<double>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SSE.h:92:3:   required from here
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
   55 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
In file included from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/SparseCore:37,
                 from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Sparse:26,
                 from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigenForward.h:31,
                 from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
                 from RcppExports.cpp:4:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of ‘class Eigen::SparseMatrixBase<Eigen::SparseMatrix<double, 0, int> >’:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:36:7:   required from ‘class Eigen::SparseCompressedBase<Eigen::SparseMatrix<double, 0, int> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:96:7:   required from ‘class Eigen::SparseMatrix<double, 0, int>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/ConstrainedConjGrad.h:61:25:   required from here
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
   47 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
In file included from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Core:370,
                 from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
                 from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
                 from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
                 from RcppExports.cpp:4:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet<int, -1>’:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57:   required from ‘struct Eigen::internal::traits<Eigen::Matrix<int, -1, 1> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7:   required from ‘class Eigen::PlainObjectBase<Eigen::Matrix<int, -1, 1> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7:   required from ‘class Eigen::Matrix<int, -1, 1>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/unsupported/Eigen/src/KroneckerProduct/KroneckerTensorProduct.h:168:29:   required from here
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<int>::type’ {aka ‘__vector(2) long long int’} [-Wignored-attributes]
  187 |          bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
      |                                       ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<int>::type’ {aka ‘__vector(2) long long int’} [-Wignored-attributes]
  187 |          bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
      |                      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<int>::type’ {aka ‘__vector(2) long long int’} [-Wignored-attributes]
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) long long int>::half’ {aka ‘__vector(2) long long int’} [-Wignored-attributes]
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:205:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<int>::type’ {aka ‘__vector(2) long long int’} [-Wignored-attributes]
  205 |   typedef typename find_best_packet_helper<Size,typename packet_traits<T>::type>::type type;
      |                                                                                        ^~~~
In file included from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Core:439,
                 from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
                 from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
                 from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
                 from RcppExports.cpp:4:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<int, -1, 1>, 0>’:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<int, -1, 1>, 1>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<int, -1, 1>, 3>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::Matrix<int, -1, 1> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::Matrix<int, -1, 1> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7:   required from ‘class Eigen::PlainObjectBase<Eigen::Matrix<int, -1, 1> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7:   required from ‘class Eigen::Matrix<int, -1, 1>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/unsupported/Eigen/src/KroneckerProduct/KroneckerTensorProduct.h:168:29:   required from here
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<int>::type’ {aka ‘__vector(2) long long int’} [-Wignored-attributes]
   55 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Transpose<Eigen::Matrix<int, -1, 1> >, 0>’:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Transpose<Eigen::Matrix<int, -1, 1> >, 1>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Transpose<Eigen::Matrix<int, -1, 1> >, 3>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::Transpose<Eigen::Matrix<int, -1, 1> > >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::Transpose<Eigen::Matrix<int, -1, 1> > >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:115:37:   required from ‘class Eigen::TransposeImpl<Eigen::Matrix<int, -1, 1>, Eigen::Dense>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37:   required from ‘class Eigen::Transpose<Eigen::Matrix<int, -1, 1> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/unsupported/Eigen/src/KroneckerProduct/KroneckerTensorProduct.h:178:72:   required from here
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<int>::type’ {aka ‘__vector(2) long long int’} [-Wignored-attributes]
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<int, -1, -1>, 0>’:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<int, -1, -1>, 1>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<int, -1, -1>, 3>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::Matrix<int, -1, -1> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::Matrix<int, -1, -1> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7:   required from ‘class Eigen::PlainObjectBase<Eigen::Matrix<int, -1, -1> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7:   required from ‘class Eigen::Matrix<int, -1, -1>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/unsupported/Eigen/src/KroneckerProduct/KroneckerTensorProduct.h:179:36:   required from here
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<int>::type’ {aka ‘__vector(2) long long int’} [-Wignored-attributes]
In file included from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Core:370,
                 from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
                 from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
                 from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
                 from RcppExports.cpp:4:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet<double, -1>’:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57:   required from ‘struct Eigen::internal::traits<Eigen::Matrix<double, -1, -1> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Map.h:18:8:   required from ‘struct Eigen::internal::traits<Eigen::Map<Eigen::Matrix<double, -1, -1> > >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/ForwardDeclarations.h:32:54:   required from ‘struct Eigen::internal::accessors_level<Eigen::Map<Eigen::Matrix<double, -1, -1> > >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/ForwardDeclarations.h:109:75:   required from ‘class Eigen::Map<Eigen::Matrix<double, -1, -1> >’
/home/biocbuild/bbs-3.14-bioc/R/library/Rcpp/include/Rcpp/InputParameter.h:64:11:   required from ‘class Rcpp::ConstInputParameter<Eigen::Map<Eigen::Matrix<double, -1, -1> > >’
RcppExports.cpp:15:85:   required from here
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
  187 |          bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
      |                                       ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
  187 |          bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
      |                      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__vector(2) double’} [-Wignored-attributes]
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:205:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
  205 |   typedef typename find_best_packet_helper<Size,typename packet_traits<T>::type>::type type;
      |                                                                                        ^~~~
In file included from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Core:439,
                 from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
                 from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
                 from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
                 from RcppExports.cpp:4:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, -1, -1>, 0>’:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, -1, -1>, 1>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, -1, -1>, 3>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::Matrix<double, -1, -1> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::Matrix<double, -1, -1> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7:   required from ‘class Eigen::PlainObjectBase<Eigen::Matrix<double, -1, -1> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7:   required from ‘class Eigen::Matrix<double, -1, -1>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Map.h:24:30:   required from ‘struct Eigen::internal::traits<Eigen::Map<Eigen::Matrix<double, -1, -1> > >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/ForwardDeclarations.h:32:54:   required from ‘struct Eigen::internal::accessors_level<Eigen::Map<Eigen::Matrix<double, -1, -1> > >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/ForwardDeclarations.h:109:75:   required from ‘class Eigen::Map<Eigen::Matrix<double, -1, -1> >’
/home/biocbuild/bbs-3.14-bioc/R/library/Rcpp/include/Rcpp/InputParameter.h:64:11:   required from ‘class Rcpp::ConstInputParameter<Eigen::Map<Eigen::Matrix<double, -1, -1> > >’
RcppExports.cpp:15:85:   required from here
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
   55 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Map<Eigen::Matrix<double, -1, -1> >, 0>’:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Map<Eigen::Matrix<double, -1, -1> >, 1>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Map<Eigen::Matrix<double, -1, -1> >, 3>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::Map<Eigen::Matrix<double, -1, -1> > >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::Map<Eigen::Matrix<double, -1, -1> > >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34:   required from ‘class Eigen::MapBase<Eigen::Map<Eigen::Matrix<double, -1, -1> >, 0>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:221:34:   required from ‘class Eigen::MapBase<Eigen::Map<Eigen::Matrix<double, -1, -1> >, 1>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Map.h:94:79:   required from ‘class Eigen::Map<Eigen::Matrix<double, -1, -1> >’
/home/biocbuild/bbs-3.14-bioc/R/library/Rcpp/include/Rcpp/InputParameter.h:64:11:   required from ‘class Rcpp::ConstInputParameter<Eigen::Map<Eigen::Matrix<double, -1, -1> > >’
RcppExports.cpp:15:85:   required from here
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
g++ -std=gnu++14 -I"/home/biocbuild/bbs-3.14-bioc/R/include" -DNDEBUG  -I'/home/biocbuild/bbs-3.14-bioc/R/library/Rcpp/include' -I'/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include' -I/usr/local/include   -fpic  -g -O2  -Wall -c mm.cpp -o mm.o
In file included from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Core:397,
                 from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
                 from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
                 from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
                 from mm.cpp:5:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:60:39: warning: ignoring attributes on template argument ‘__m128’ {aka ‘__vector(4) float’} [-Wignored-attributes]
   60 | template<> struct is_arithmetic<__m128>  { enum { value = true }; };
      |                                       ^
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:61:40: warning: ignoring attributes on template argument ‘__m128i’ {aka ‘__vector(2) long long int’} [-Wignored-attributes]
   61 | template<> struct is_arithmetic<__m128i> { enum { value = true }; };
      |                                        ^
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:62:40: warning: ignoring attributes on template argument ‘__m128d’ {aka ‘__vector(2) double’} [-Wignored-attributes]
   62 | template<> struct is_arithmetic<__m128d> { enum { value = true }; };
      |                                        ^
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:161:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__vector(4) float’} [-Wignored-attributes]
  161 | template<> struct unpacket_traits<Packet4f> { typedef float  type; enum {size=4, alignment=Aligned16}; typedef Packet4f half; };
      |                                           ^
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:162:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__vector(2) double’} [-Wignored-attributes]
  162 | template<> struct unpacket_traits<Packet2d> { typedef double type; enum {size=2, alignment=Aligned16}; typedef Packet2d half; };
      |                                           ^
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:163:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4i’ {aka ‘__vector(2) long long int’} [-Wignored-attributes]
  163 | template<> struct unpacket_traits<Packet4i> { typedef int    type; enum {size=4, alignment=Aligned16}; typedef Packet4i half; };
      |                                           ^
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:718:35: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__vector(4) float’} [-Wignored-attributes]
  718 | struct palign_impl<Offset,Packet4f>
      |                                   ^
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:741:35: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4i’ {aka ‘__vector(2) long long int’} [-Wignored-attributes]
  741 | struct palign_impl<Offset,Packet4i>
      |                                   ^
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:764:35: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__vector(2) double’} [-Wignored-attributes]
  764 | struct palign_impl<Offset,Packet2d>
      |                                   ^
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:778:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__vector(4) float’} [-Wignored-attributes]
  778 | ptranspose(PacketBlock<Packet4f,4>& kernel) {
      |                                  ^
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:783:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__vector(2) double’} [-Wignored-attributes]
  783 | ptranspose(PacketBlock<Packet2d,2>& kernel) {
      |                                  ^
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:790:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4i’ {aka ‘__vector(2) long long int’} [-Wignored-attributes]
  790 | ptranspose(PacketBlock<Packet4i,4>& kernel) {
      |                                  ^
In file included from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Core:377,
                 from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
                 from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
                 from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
                 from mm.cpp:5:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:15:70: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__vector(4) float’} [-Wignored-attributes]
   15 |   template<> struct conj_helper<PACKET_REAL, PACKET_CPLX, false,false> {                                          \
      |                                                                      ^
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:232:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’
  232 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f)
      | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:22:70: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__vector(4) float’} [-Wignored-attributes]
   22 |   template<> struct conj_helper<PACKET_CPLX, PACKET_REAL, false,false> {                                          \
      |                                                                      ^
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:232:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’
  232 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f)
      | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:15:70: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__vector(2) double’} [-Wignored-attributes]
   15 |   template<> struct conj_helper<PACKET_REAL, PACKET_CPLX, false,false> {                                          \
      |                                                                      ^
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:417:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’
  417 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d)
      | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:22:70: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__vector(2) double’} [-Wignored-attributes]
   22 |   template<> struct conj_helper<PACKET_CPLX, PACKET_REAL, false,false> {                                          \
      |                                                                      ^
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:417:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’
  417 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d)
      | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Core:370,
                 from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
                 from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
                 from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
                 from mm.cpp:5:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet<float, 4>’:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57:   required from ‘struct Eigen::internal::traits<Eigen::Matrix<float, 4, 1> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:242:7:   required from ‘struct Eigen::internal::traits<Eigen::Quaternion<float> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SSE.h:24:46:   required from here
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__vector(4) float’} [-Wignored-attributes]
  187 |          bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
      |                                       ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__vector(4) float’} [-Wignored-attributes]
  187 |          bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
      |                      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__vector(4) float’} [-Wignored-attributes]
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(4) float>::half’ {aka ‘__vector(4) float’} [-Wignored-attributes]
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:205:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__vector(4) float’} [-Wignored-attributes]
  205 |   typedef typename find_best_packet_helper<Size,typename packet_traits<T>::type>::type type;
      |                                                                                        ^~~~
In file included from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Core:439,
                 from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
                 from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
                 from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
                 from mm.cpp:5:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<float, 4, 1>, 0>’:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<float, 4, 1>, 1>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<float, 4, 1>, 3>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::Matrix<float, 4, 1> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::Matrix<float, 4, 1> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7:   required from ‘class Eigen::PlainObjectBase<Eigen::Matrix<float, 4, 1> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7:   required from ‘class Eigen::Matrix<float, 4, 1>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50:   required from ‘class Eigen::QuaternionBase<Eigen::Quaternion<float> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:250:7:   required from ‘class Eigen::Quaternion<float>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SSE.h:27:3:   required from here
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<float>::type’ {aka ‘__vector(4) float’} [-Wignored-attributes]
   55 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
In file included from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Core:370,
                 from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
                 from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
                 from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
                 from mm.cpp:5:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet<double, 4>’:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57:   required from ‘struct Eigen::internal::traits<Eigen::Matrix<double, 4, 1> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:242:7:   required from ‘struct Eigen::internal::traits<Eigen::Quaternion<double> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SSE.h:88:47:   required from here
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
  187 |          bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
      |                                       ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
  187 |          bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
      |                      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__vector(2) double’} [-Wignored-attributes]
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:205:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
  205 |   typedef typename find_best_packet_helper<Size,typename packet_traits<T>::type>::type type;
      |                                                                                        ^~~~
In file included from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Core:439,
                 from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
                 from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
                 from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
                 from mm.cpp:5:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, 4, 1>, 0>’:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, 4, 1>, 1>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, 4, 1>, 3>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::Matrix<double, 4, 1> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::Matrix<double, 4, 1> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7:   required from ‘class Eigen::PlainObjectBase<Eigen::Matrix<double, 4, 1> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7:   required from ‘class Eigen::Matrix<double, 4, 1>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50:   required from ‘class Eigen::QuaternionBase<Eigen::Quaternion<double> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:250:7:   required from ‘class Eigen::Quaternion<double>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SSE.h:92:3:   required from here
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
   55 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
In file included from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/SparseCore:37,
                 from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Sparse:26,
                 from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigenForward.h:31,
                 from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
                 from mm.cpp:5:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of ‘class Eigen::SparseMatrixBase<Eigen::SparseMatrix<double, 0, int> >’:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:36:7:   required from ‘class Eigen::SparseCompressedBase<Eigen::SparseMatrix<double, 0, int> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:96:7:   required from ‘class Eigen::SparseMatrix<double, 0, int>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/ConstrainedConjGrad.h:61:25:   required from here
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
   47 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
In file included from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Core:370,
                 from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
                 from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
                 from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
                 from mm.cpp:5:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet<int, -1>’:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57:   required from ‘struct Eigen::internal::traits<Eigen::Matrix<int, -1, 1> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7:   required from ‘class Eigen::PlainObjectBase<Eigen::Matrix<int, -1, 1> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7:   required from ‘class Eigen::Matrix<int, -1, 1>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/unsupported/Eigen/src/KroneckerProduct/KroneckerTensorProduct.h:168:29:   required from here
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<int>::type’ {aka ‘__vector(2) long long int’} [-Wignored-attributes]
  187 |          bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
      |                                       ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<int>::type’ {aka ‘__vector(2) long long int’} [-Wignored-attributes]
  187 |          bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
      |                      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<int>::type’ {aka ‘__vector(2) long long int’} [-Wignored-attributes]
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) long long int>::half’ {aka ‘__vector(2) long long int’} [-Wignored-attributes]
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:205:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<int>::type’ {aka ‘__vector(2) long long int’} [-Wignored-attributes]
  205 |   typedef typename find_best_packet_helper<Size,typename packet_traits<T>::type>::type type;
      |                                                                                        ^~~~
In file included from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Core:439,
                 from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
                 from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
                 from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
                 from mm.cpp:5:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<int, -1, 1>, 0>’:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<int, -1, 1>, 1>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<int, -1, 1>, 3>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::Matrix<int, -1, 1> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::Matrix<int, -1, 1> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7:   required from ‘class Eigen::PlainObjectBase<Eigen::Matrix<int, -1, 1> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7:   required from ‘class Eigen::Matrix<int, -1, 1>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/unsupported/Eigen/src/KroneckerProduct/KroneckerTensorProduct.h:168:29:   required from here
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<int>::type’ {aka ‘__vector(2) long long int’} [-Wignored-attributes]
   55 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Transpose<Eigen::Matrix<int, -1, 1> >, 0>’:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Transpose<Eigen::Matrix<int, -1, 1> >, 1>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Transpose<Eigen::Matrix<int, -1, 1> >, 3>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::Transpose<Eigen::Matrix<int, -1, 1> > >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::Transpose<Eigen::Matrix<int, -1, 1> > >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:115:37:   required from ‘class Eigen::TransposeImpl<Eigen::Matrix<int, -1, 1>, Eigen::Dense>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37:   required from ‘class Eigen::Transpose<Eigen::Matrix<int, -1, 1> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/unsupported/Eigen/src/KroneckerProduct/KroneckerTensorProduct.h:178:72:   required from here
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<int>::type’ {aka ‘__vector(2) long long int’} [-Wignored-attributes]
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<int, -1, -1>, 0>’:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<int, -1, -1>, 1>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<int, -1, -1>, 3>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::Matrix<int, -1, -1> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::Matrix<int, -1, -1> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7:   required from ‘class Eigen::PlainObjectBase<Eigen::Matrix<int, -1, -1> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7:   required from ‘class Eigen::Matrix<int, -1, -1>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/unsupported/Eigen/src/KroneckerProduct/KroneckerTensorProduct.h:179:36:   required from here
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<int>::type’ {aka ‘__vector(2) long long int’} [-Wignored-attributes]
In file included from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Core:370,
                 from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
                 from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
                 from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
                 from mm.cpp:5:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet<double, -1>’:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57:   required from ‘struct Eigen::internal::traits<Eigen::Matrix<double, -1, -1> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Map.h:18:8:   required from ‘struct Eigen::internal::traits<Eigen::Map<Eigen::Matrix<double, -1, -1> > >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/ForwardDeclarations.h:32:54:   required from ‘struct Eigen::internal::accessors_level<Eigen::Map<Eigen::Matrix<double, -1, -1> > >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/ForwardDeclarations.h:109:75:   required from ‘class Eigen::Map<Eigen::Matrix<double, -1, -1> >’
mm.cpp:9:88:   required from here
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
  187 |          bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
      |                                       ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
  187 |          bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
      |                      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__vector(2) double’} [-Wignored-attributes]
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:205:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
  205 |   typedef typename find_best_packet_helper<Size,typename packet_traits<T>::type>::type type;
      |                                                                                        ^~~~
In file included from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Core:439,
                 from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
                 from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
                 from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
                 from mm.cpp:5:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, -1, -1>, 0>’:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, -1, -1>, 1>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Matrix<double, -1, -1>, 3>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::Matrix<double, -1, -1> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::Matrix<double, -1, -1> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7:   required from ‘class Eigen::PlainObjectBase<Eigen::Matrix<double, -1, -1> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7:   required from ‘class Eigen::Matrix<double, -1, -1>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Map.h:24:30:   required from ‘struct Eigen::internal::traits<Eigen::Map<Eigen::Matrix<double, -1, -1> > >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/ForwardDeclarations.h:32:54:   required from ‘struct Eigen::internal::accessors_level<Eigen::Map<Eigen::Matrix<double, -1, -1> > >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/ForwardDeclarations.h:109:75:   required from ‘class Eigen::Map<Eigen::Matrix<double, -1, -1> >’
mm.cpp:9:88:   required from here
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
   55 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Map<Eigen::Matrix<double, -1, -1> >, 0>’:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Map<Eigen::Matrix<double, -1, -1> >, 1>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Map<Eigen::Matrix<double, -1, -1> >, 3>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::Map<Eigen::Matrix<double, -1, -1> > >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::Map<Eigen::Matrix<double, -1, -1> > >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34:   required from ‘class Eigen::MapBase<Eigen::Map<Eigen::Matrix<double, -1, -1> >, 0>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:221:34:   required from ‘class Eigen::MapBase<Eigen::Map<Eigen::Matrix<double, -1, -1> >, 1>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Map.h:94:79:   required from ‘class Eigen::Map<Eigen::Matrix<double, -1, -1> >’
mm.cpp:9:88:   required from here
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Product<Eigen::Map<Eigen::Matrix<double, -1, -1> >, Eigen::Map<Eigen::Matrix<double, -1, -1> >, 0>, 0>’:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::Product<Eigen::Map<Eigen::Matrix<double, -1, -1> >, Eigen::Map<Eigen::Matrix<double, -1, -1> >, 0> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::Product<Eigen::Map<Eigen::Matrix<double, -1, -1> >, Eigen::Map<Eigen::Matrix<double, -1, -1> >, 0> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:115:7:   required from ‘class Eigen::internal::dense_product_base<Eigen::Map<Eigen::Matrix<double, -1, -1> >, Eigen::Map<Eigen::Matrix<double, -1, -1> >, 0, 8>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:147:7:   required from ‘class Eigen::ProductImpl<Eigen::Map<Eigen::Matrix<double, -1, -1> >, Eigen::Map<Eigen::Matrix<double, -1, -1> >, 0, Eigen::Dense>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:71:7:   required from ‘class Eigen::Product<Eigen::Map<Eigen::Matrix<double, -1, -1> >, Eigen::Map<Eigen::Matrix<double, -1, -1> >, 0>’
mm.cpp:10:29:   required from here
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Product<Eigen::Map<Eigen::Matrix<double, -1, -1> >, Eigen::Map<Eigen::Matrix<double, -1, -1> >, 1>, 0>’:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::Product<Eigen::Map<Eigen::Matrix<double, -1, -1> >, Eigen::Map<Eigen::Matrix<double, -1, -1> >, 1> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::Product<Eigen::Map<Eigen::Matrix<double, -1, -1> >, Eigen::Map<Eigen::Matrix<double, -1, -1> >, 1> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:115:7:   required from ‘class Eigen::internal::dense_product_base<Eigen::Map<Eigen::Matrix<double, -1, -1> >, Eigen::Map<Eigen::Matrix<double, -1, -1> >, 1, 8>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:147:7:   required from ‘class Eigen::ProductImpl<Eigen::Map<Eigen::Matrix<double, -1, -1> >, Eigen::Map<Eigen::Matrix<double, -1, -1> >, 1, Eigen::Dense>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Product.h:71:7:   required from ‘class Eigen::Product<Eigen::Map<Eigen::Matrix<double, -1, -1> >, Eigen::Map<Eigen::Matrix<double, -1, -1> >, 1>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:436:29:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:148:43:   required from ‘static void Eigen::internal::Assignment<DstXprType, Eigen::Product<Lhs, Rhs, Options>, Eigen::internal::assign_op<Scalar, Scalar>, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == Eigen::DefaultProduct) || (Options == Eigen::AliasFreeProduct))>::type>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op<Scalar, Scalar>&) [with DstXprType = Eigen::Matrix<double, -1, -1>; Lhs = Eigen::Map<Eigen::Matrix<double, -1, -1> >; Rhs = Eigen::Map<Eigen::Matrix<double, -1, -1> >; int Options = 0; Scalar = double; Eigen::internal::Assignment<DstXprType, Eigen::Product<Lhs, Rhs, Options>, Eigen::internal::assign_op<Scalar, Scalar>, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == Eigen::DefaultProduct) || (Options == Eigen::AliasFreeProduct))>::type>::SrcXprType = Eigen::Product<Eigen::Map<Eigen::Matrix<double, -1, -1> >, Eigen::Map<Eigen::Matrix<double, -1, -1> >, 0>]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49:   required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix<double, -1, -1>; Src = Eigen::Product<Eigen::Map<Eigen::Matrix<double, -1, -1> >, Eigen::Map<Eigen::Matrix<double, -1, -1> >, 0>; Func = Eigen::internal::assign_op<double, double>]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:732:41:   required from ‘Derived& Eigen::PlainObjectBase<Derived>::_set_noalias(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::Product<Eigen::Map<Eigen::Matrix<double, -1, -1> >, Eigen::Map<Eigen::Matrix<double, -1, -1> >, 0>; Derived = Eigen::Matrix<double, -1, -1>]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:537:7:   required from ‘Eigen::PlainObjectBase<Derived>::PlainObjectBase(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::Product<Eigen::Map<Eigen::Matrix<double, -1, -1> >, Eigen::Map<Eigen::Matrix<double, -1, -1> >, 0>; Derived = Eigen::Matrix<double, -1, -1>]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:377:29:   required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase<OtherDerived>&) [with OtherDerived = Eigen::Product<Eigen::Map<Eigen::Matrix<double, -1, -1> >, Eigen::Map<Eigen::Matrix<double, -1, -1> >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’
mm.cpp:10:29:   required from here
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, Eigen::Matrix<double, -1, -1> >, 0>’:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, Eigen::Matrix<double, -1, -1> > >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, Eigen::Matrix<double, -1, -1> > >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:60:7:   required from ‘class Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, Eigen::Matrix<double, -1, -1> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:327:30:   required from ‘Derived& Eigen::DenseBase<Derived>::setConstant(const Scalar&) [with Derived = Eigen::Matrix<double, -1, -1>; Eigen::DenseBase<Derived>::Scalar = double]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:501:10:   [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:148:43:   required from ‘static void Eigen::internal::Assignment<DstXprType, Eigen::Product<Lhs, Rhs, Options>, Eigen::internal::assign_op<Scalar, Scalar>, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == Eigen::DefaultProduct) || (Options == Eigen::AliasFreeProduct))>::type>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op<Scalar, Scalar>&) [with DstXprType = Eigen::Matrix<double, -1, -1>; Lhs = Eigen::Map<Eigen::Matrix<double, -1, -1> >; Rhs = Eigen::Map<Eigen::Matrix<double, -1, -1> >; int Options = 0; Scalar = double; Eigen::internal::Assignment<DstXprType, Eigen::Product<Lhs, Rhs, Options>, Eigen::internal::assign_op<Scalar, Scalar>, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == Eigen::DefaultProduct) || (Options == Eigen::AliasFreeProduct))>::type>::SrcXprType = Eigen::Product<Eigen::Map<Eigen::Matrix<double, -1, -1> >, Eigen::Map<Eigen::Matrix<double, -1, -1> >, 0>]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49:   required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix<double, -1, -1>; Src = Eigen::Product<Eigen::Map<Eigen::Matrix<double, -1, -1> >, Eigen::Map<Eigen::Matrix<double, -1, -1> >, 0>; Func = Eigen::internal::assign_op<double, double>]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:732:41:   required from ‘Derived& Eigen::PlainObjectBase<Derived>::_set_noalias(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::Product<Eigen::Map<Eigen::Matrix<double, -1, -1> >, Eigen::Map<Eigen::Matrix<double, -1, -1> >, 0>; Derived = Eigen::Matrix<double, -1, -1>]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:537:7:   required from ‘Eigen::PlainObjectBase<Derived>::PlainObjectBase(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::Product<Eigen::Map<Eigen::Matrix<double, -1, -1> >, Eigen::Map<Eigen::Matrix<double, -1, -1> >, 0>; Derived = Eigen::Matrix<double, -1, -1>]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:377:29:   required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase<OtherDerived>&) [with OtherDerived = Eigen::Product<Eigen::Map<Eigen::Matrix<double, -1, -1> >, Eigen::Map<Eigen::Matrix<double, -1, -1> >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’
mm.cpp:10:29:   required from here
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
In file included from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Core:496,
                 from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
                 from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
                 from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
                 from mm.cpp:5:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h: In instantiation of ‘class Eigen::internal::gebp_traits<double, double, false, false>’:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:106:40:   required from ‘void Eigen::internal::evaluateProductBlockingSizesHeuristic(Index&, Index&, Index&, Index) [with LhsScalar = double; RhsScalar = double; int KcFactor = 1; Index = long int]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:301:81:   required from ‘void Eigen::internal::computeProductBlockingSizes(Index&, Index&, Index&, Index) [with LhsScalar = double; RhsScalar = double; int KcFactor = 1; Index = long int]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:353:66:   required from ‘Eigen::internal::gemm_blocking_space<StorageOrder, _LhsScalar, _RhsScalar, MaxRows, MaxCols, MaxDepth, KcFactor, false>::gemm_blocking_space(Eigen::Index, Eigen::Index, Eigen::Index, Eigen::Index, bool) [with int StorageOrder = 0; _LhsScalar = double; _RhsScalar = double; int MaxRows = -1; int MaxCols = -1; int MaxDepth = -1; int KcFactor = 1; Eigen::Index = long int]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:485:18:   required from ‘static void Eigen::internal::generic_product_impl<Lhs, Rhs, Eigen::DenseShape, Eigen::DenseShape, 8>::scaleAndAddTo(Dest&, const Lhs&, const Rhs&, const Scalar&) [with Dest = Eigen::Matrix<double, -1, -1>; Lhs = Eigen::Map<Eigen::Matrix<double, -1, -1> >; Rhs = Eigen::Map<Eigen::Matrix<double, -1, -1> >; Eigen::internal::generic_product_impl<Lhs, Rhs, Eigen::DenseShape, Eigen::DenseShape, 8>::Scalar = double]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:437:20:   required from ‘static void Eigen::internal::generic_product_impl<Lhs, Rhs, Eigen::DenseShape, Eigen::DenseShape, 8>::evalTo(Dst&, const Lhs&, const Rhs&) [with Dst = Eigen::Matrix<double, -1, -1>; Lhs = Eigen::Map<Eigen::Matrix<double, -1, -1> >; Rhs = Eigen::Map<Eigen::Matrix<double, -1, -1> >]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:148:43:   required from ‘static void Eigen::internal::Assignment<DstXprType, Eigen::Product<Lhs, Rhs, Options>, Eigen::internal::assign_op<Scalar, Scalar>, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == Eigen::DefaultProduct) || (Options == Eigen::AliasFreeProduct))>::type>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op<Scalar, Scalar>&) [with DstXprType = Eigen::Matrix<double, -1, -1>; Lhs = Eigen::Map<Eigen::Matrix<double, -1, -1> >; Rhs = Eigen::Map<Eigen::Matrix<double, -1, -1> >; int Options = 0; Scalar = double; Eigen::internal::Assignment<DstXprType, Eigen::Product<Lhs, Rhs, Options>, Eigen::internal::assign_op<Scalar, Scalar>, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == Eigen::DefaultProduct) || (Options == Eigen::AliasFreeProduct))>::type>::SrcXprType = Eigen::Product<Eigen::Map<Eigen::Matrix<double, -1, -1> >, Eigen::Map<Eigen::Matrix<double, -1, -1> >, 0>]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49:   required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix<double, -1, -1>; Src = Eigen::Product<Eigen::Map<Eigen::Matrix<double, -1, -1> >, Eigen::Map<Eigen::Matrix<double, -1, -1> >, 0>; Func = Eigen::internal::assign_op<double, double>]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:732:41:   required from ‘Derived& Eigen::PlainObjectBase<Derived>::_set_noalias(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::Product<Eigen::Map<Eigen::Matrix<double, -1, -1> >, Eigen::Map<Eigen::Matrix<double, -1, -1> >, 0>; Derived = Eigen::Matrix<double, -1, -1>]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:537:7:   required from ‘Eigen::PlainObjectBase<Derived>::PlainObjectBase(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::Product<Eigen::Map<Eigen::Matrix<double, -1, -1> >, Eigen::Map<Eigen::Matrix<double, -1, -1> >, 0>; Derived = Eigen::Matrix<double, -1, -1>]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:377:29:   required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase<OtherDerived>&) [with OtherDerived = Eigen::Product<Eigen::Map<Eigen::Matrix<double, -1, -1> >, Eigen::Map<Eigen::Matrix<double, -1, -1> >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’
mm.cpp:10:29:   required from here
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:391:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
  391 |   typedef typename conditional<Vectorizable,_LhsPacket,LhsScalar>::type LhsPacket;
      |                                                                         ^~~~~~~~~
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:392:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
  392 |   typedef typename conditional<Vectorizable,_RhsPacket,RhsScalar>::type RhsPacket;
      |                                                                         ^~~~~~~~~
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:393:73: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
  393 |   typedef typename conditional<Vectorizable,_ResPacket,ResScalar>::type ResPacket;
      |                                                                         ^~~~~~~~~
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h: In instantiation of ‘void Eigen::internal::gemm_pack_rhs<Scalar, Index, DataMapper, nr, 0, Conjugate, PanelMode>::operator()(Scalar*, const DataMapper&, Index, Index, Index, Index) [with Scalar = double; Index = long int; DataMapper = Eigen::internal::const_blas_data_mapper<double, long int, 0>; int nr = 4; bool Conjugate = false; bool PanelMode = false]’:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:193:21:   required from ‘static void Eigen::internal::general_matrix_matrix_product<Index, LhsScalar, LhsStorageOrder, ConjugateLhs, RhsScalar, RhsStorageOrder, ConjugateRhs, 0, ResInnerStride>::run(Index, Index, Index, const LhsScalar*, Index, const RhsScalar*, Index, Eigen::internal::general_matrix_matrix_product<Index, LhsScalar, LhsStorageOrder, ConjugateLhs, RhsScalar, RhsStorageOrder, ConjugateRhs, 0, ResInnerStride>::ResScalar*, Index, Index, Eigen::internal::general_matrix_matrix_product<Index, LhsScalar, LhsStorageOrder, ConjugateLhs, RhsScalar, RhsStorageOrder, ConjugateRhs, 0, ResInnerStride>::ResScalar, Eigen::internal::level3_blocking<LhsScalar, RhsScalar>&, Eigen::internal::GemmParallelInfo<Index>*) [with Index = long int; LhsScalar = double; int LhsStorageOrder = 0; bool ConjugateLhs = false; RhsScalar = double; int RhsStorageOrder = 0; bool ConjugateRhs = false; int ResInnerStride = 1; Eigen::internal::general_matrix_matrix_product<Index, LhsScalar, LhsStorageOrder, ConjugateLhs, RhsScalar, RhsStorageOrder, ConjugateRhs, 0, ResInnerStride>::ResScalar = double]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:228:14:   required from ‘void Eigen::internal::gemm_functor<Scalar, Index, Gemm, Lhs, Rhs, Dest, BlockingType>::operator()(Index, Index, Index, Index, Eigen::internal::GemmParallelInfo<Index>*) const [with Scalar = double; Index = long int; Gemm = Eigen::internal::general_matrix_matrix_product<long int, double, 0, false, double, 0, false, 0, 1>; Lhs = Eigen::Map<Eigen::Matrix<double, -1, -1> >; Rhs = Eigen::Map<Eigen::Matrix<double, -1, -1> >; Dest = Eigen::Matrix<double, -1, -1>; BlockingType = Eigen::internal::gemm_blocking_space<0, double, double, -1, -1, -1, 1, false>]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/Parallelizer.h:98:7:   required from ‘void Eigen::internal::parallelize_gemm(const Functor&, Index, Index, Index, bool) [with bool Condition = true; Functor = Eigen::internal::gemm_functor<double, long int, Eigen::internal::general_matrix_matrix_product<long int, double, 0, false, double, 0, false, 0, 1>, Eigen::Map<Eigen::Matrix<double, -1, -1> >, Eigen::Map<Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, Eigen::internal::gemm_blocking_space<0, double, double, -1, -1, -1, 1, false> >; Index = long int]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:487:9:   required from ‘static void Eigen::internal::generic_product_impl<Lhs, Rhs, Eigen::DenseShape, Eigen::DenseShape, 8>::scaleAndAddTo(Dest&, const Lhs&, const Rhs&, const Scalar&) [with Dest = Eigen::Matrix<double, -1, -1>; Lhs = Eigen::Map<Eigen::Matrix<double, -1, -1> >; Rhs = Eigen::Map<Eigen::Matrix<double, -1, -1> >; Eigen::internal::generic_product_impl<Lhs, Rhs, Eigen::DenseShape, Eigen::DenseShape, 8>::Scalar = double]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:437:20:   required from ‘static void Eigen::internal::generic_product_impl<Lhs, Rhs, Eigen::DenseShape, Eigen::DenseShape, 8>::evalTo(Dst&, const Lhs&, const Rhs&) [with Dst = Eigen::Matrix<double, -1, -1>; Lhs = Eigen::Map<Eigen::Matrix<double, -1, -1> >; Rhs = Eigen::Map<Eigen::Matrix<double, -1, -1> >]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:148:43:   required from ‘static void Eigen::internal::Assignment<DstXprType, Eigen::Product<Lhs, Rhs, Options>, Eigen::internal::assign_op<Scalar, Scalar>, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == Eigen::DefaultProduct) || (Options == Eigen::AliasFreeProduct))>::type>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op<Scalar, Scalar>&) [with DstXprType = Eigen::Matrix<double, -1, -1>; Lhs = Eigen::Map<Eigen::Matrix<double, -1, -1> >; Rhs = Eigen::Map<Eigen::Matrix<double, -1, -1> >; int Options = 0; Scalar = double; Eigen::internal::Assignment<DstXprType, Eigen::Product<Lhs, Rhs, Options>, Eigen::internal::assign_op<Scalar, Scalar>, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == Eigen::DefaultProduct) || (Options == Eigen::AliasFreeProduct))>::type>::SrcXprType = Eigen::Product<Eigen::Map<Eigen::Matrix<double, -1, -1> >, Eigen::Map<Eigen::Matrix<double, -1, -1> >, 0>]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49:   required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix<double, -1, -1>; Src = Eigen::Product<Eigen::Map<Eigen::Matrix<double, -1, -1> >, Eigen::Map<Eigen::Matrix<double, -1, -1> >, 0>; Func = Eigen::internal::assign_op<double, double>]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:732:41:   required from ‘Derived& Eigen::PlainObjectBase<Derived>::_set_noalias(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::Product<Eigen::Map<Eigen::Matrix<double, -1, -1> >, Eigen::Map<Eigen::Matrix<double, -1, -1> >, 0>; Derived = Eigen::Matrix<double, -1, -1>]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:537:7:   required from ‘Eigen::PlainObjectBase<Derived>::PlainObjectBase(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::Product<Eigen::Map<Eigen::Matrix<double, -1, -1> >, Eigen::Map<Eigen::Matrix<double, -1, -1> >, 0>; Derived = Eigen::Matrix<double, -1, -1>]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:377:29:   required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase<OtherDerived>&) [with OtherDerived = Eigen::Product<Eigen::Map<Eigen::Matrix<double, -1, -1> >, Eigen::Map<Eigen::Matrix<double, -1, -1> >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’
mm.cpp:10:29:   required from here
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:1981:62: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
 1981 |           PacketBlock<Packet,(PacketSize%4)==0?4:PacketSize> kernel;
      |                                                              ^~~~~~
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h: In instantiation of ‘void Eigen::internal::gebp_kernel<LhsScalar, RhsScalar, Index, DataMapper, mr, nr, ConjugateLhs, ConjugateRhs>::operator()(const DataMapper&, const LhsScalar*, const RhsScalar*, Index, Index, Index, Eigen::internal::gebp_kernel<LhsScalar, RhsScalar, Index, DataMapper, mr, nr, ConjugateLhs, ConjugateRhs>::ResScalar, Index, Index, Index, Index) [with LhsScalar = double; RhsScalar = double; Index = long int; DataMapper = Eigen::internal::blas_data_mapper<double, long int, 0, 0, 1>; int mr = 4; int nr = 4; bool ConjugateLhs = false; bool ConjugateRhs = false; Eigen::internal::gebp_kernel<LhsScalar, RhsScalar, Index, DataMapper, mr, nr, ConjugateLhs, ConjugateRhs>::ResScalar = double]’:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:196:15:   required from ‘static void Eigen::internal::general_matrix_matrix_product<Index, LhsScalar, LhsStorageOrder, ConjugateLhs, RhsScalar, RhsStorageOrder, ConjugateRhs, 0, ResInnerStride>::run(Index, Index, Index, const LhsScalar*, Index, const RhsScalar*, Index, Eigen::internal::general_matrix_matrix_product<Index, LhsScalar, LhsStorageOrder, ConjugateLhs, RhsScalar, RhsStorageOrder, ConjugateRhs, 0, ResInnerStride>::ResScalar*, Index, Index, Eigen::internal::general_matrix_matrix_product<Index, LhsScalar, LhsStorageOrder, ConjugateLhs, RhsScalar, RhsStorageOrder, ConjugateRhs, 0, ResInnerStride>::ResScalar, Eigen::internal::level3_blocking<LhsScalar, RhsScalar>&, Eigen::internal::GemmParallelInfo<Index>*) [with Index = long int; LhsScalar = double; int LhsStorageOrder = 0; bool ConjugateLhs = false; RhsScalar = double; int RhsStorageOrder = 0; bool ConjugateRhs = false; int ResInnerStride = 1; Eigen::internal::general_matrix_matrix_product<Index, LhsScalar, LhsStorageOrder, ConjugateLhs, RhsScalar, RhsStorageOrder, ConjugateRhs, 0, ResInnerStride>::ResScalar = double]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:228:14:   required from ‘void Eigen::internal::gemm_functor<Scalar, Index, Gemm, Lhs, Rhs, Dest, BlockingType>::operator()(Index, Index, Index, Index, Eigen::internal::GemmParallelInfo<Index>*) const [with Scalar = double; Index = long int; Gemm = Eigen::internal::general_matrix_matrix_product<long int, double, 0, false, double, 0, false, 0, 1>; Lhs = Eigen::Map<Eigen::Matrix<double, -1, -1> >; Rhs = Eigen::Map<Eigen::Matrix<double, -1, -1> >; Dest = Eigen::Matrix<double, -1, -1>; BlockingType = Eigen::internal::gemm_blocking_space<0, double, double, -1, -1, -1, 1, false>]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/Parallelizer.h:98:7:   required from ‘void Eigen::internal::parallelize_gemm(const Functor&, Index, Index, Index, bool) [with bool Condition = true; Functor = Eigen::internal::gemm_functor<double, long int, Eigen::internal::general_matrix_matrix_product<long int, double, 0, false, double, 0, false, 0, 1>, Eigen::Map<Eigen::Matrix<double, -1, -1> >, Eigen::Map<Eigen::Matrix<double, -1, -1> >, Eigen::Matrix<double, -1, -1>, Eigen::internal::gemm_blocking_space<0, double, double, -1, -1, -1, 1, false> >; Index = long int]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:487:9:   required from ‘static void Eigen::internal::generic_product_impl<Lhs, Rhs, Eigen::DenseShape, Eigen::DenseShape, 8>::scaleAndAddTo(Dest&, const Lhs&, const Rhs&, const Scalar&) [with Dest = Eigen::Matrix<double, -1, -1>; Lhs = Eigen::Map<Eigen::Matrix<double, -1, -1> >; Rhs = Eigen::Map<Eigen::Matrix<double, -1, -1> >; Eigen::internal::generic_product_impl<Lhs, Rhs, Eigen::DenseShape, Eigen::DenseShape, 8>::Scalar = double]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:437:20:   required from ‘static void Eigen::internal::generic_product_impl<Lhs, Rhs, Eigen::DenseShape, Eigen::DenseShape, 8>::evalTo(Dst&, const Lhs&, const Rhs&) [with Dst = Eigen::Matrix<double, -1, -1>; Lhs = Eigen::Map<Eigen::Matrix<double, -1, -1> >; Rhs = Eigen::Map<Eigen::Matrix<double, -1, -1> >]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:148:43:   required from ‘static void Eigen::internal::Assignment<DstXprType, Eigen::Product<Lhs, Rhs, Options>, Eigen::internal::assign_op<Scalar, Scalar>, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == Eigen::DefaultProduct) || (Options == Eigen::AliasFreeProduct))>::type>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op<Scalar, Scalar>&) [with DstXprType = Eigen::Matrix<double, -1, -1>; Lhs = Eigen::Map<Eigen::Matrix<double, -1, -1> >; Rhs = Eigen::Map<Eigen::Matrix<double, -1, -1> >; int Options = 0; Scalar = double; Eigen::internal::Assignment<DstXprType, Eigen::Product<Lhs, Rhs, Options>, Eigen::internal::assign_op<Scalar, Scalar>, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == Eigen::DefaultProduct) || (Options == Eigen::AliasFreeProduct))>::type>::SrcXprType = Eigen::Product<Eigen::Map<Eigen::Matrix<double, -1, -1> >, Eigen::Map<Eigen::Matrix<double, -1, -1> >, 0>]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49:   required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix<double, -1, -1>; Src = Eigen::Product<Eigen::Map<Eigen::Matrix<double, -1, -1> >, Eigen::Map<Eigen::Matrix<double, -1, -1> >, 0>; Func = Eigen::internal::assign_op<double, double>]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:732:41:   required from ‘Derived& Eigen::PlainObjectBase<Derived>::_set_noalias(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::Product<Eigen::Map<Eigen::Matrix<double, -1, -1> >, Eigen::Map<Eigen::Matrix<double, -1, -1> >, 0>; Derived = Eigen::Matrix<double, -1, -1>]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:537:7:   required from ‘Eigen::PlainObjectBase<Derived>::PlainObjectBase(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::Product<Eigen::Map<Eigen::Matrix<double, -1, -1> >, Eigen::Map<Eigen::Matrix<double, -1, -1> >, 0>; Derived = Eigen::Matrix<double, -1, -1>]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:377:29:   required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase<OtherDerived>&) [with OtherDerived = Eigen::Product<Eigen::Map<Eigen::Matrix<double, -1, -1> >, Eigen::Map<Eigen::Matrix<double, -1, -1> >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’
mm.cpp:10:29:   required from here
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:1537:21: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__vector(2) double’} [-Wignored-attributes]
 1537 |           const int SResPacketHalfSize = unpacket_traits<typename unpacket_traits<SResPacket>::half>::size;
      |                     ^~~~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:1592:135: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__vector(2) double’} [-Wignored-attributes]
 1592 |               typedef typename conditional<SwappedTraits::LhsProgress>=8,typename unpacket_traits<SResPacket>::half,SResPacket>::type SResPacketHalf;
      |                                                                                                                                       ^~~~~~~~~~~~~~
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:1593:135: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__vector(2) double’} [-Wignored-attributes]
 1593 |               typedef typename conditional<SwappedTraits::LhsProgress>=8,typename unpacket_traits<SLhsPacket>::half,SLhsPacket>::type SLhsPacketHalf;
      |                                                                                                                                       ^~~~~~~~~~~~~~
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:1594:135: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__vector(2) double’} [-Wignored-attributes]
 1594 |               typedef typename conditional<SwappedTraits::LhsProgress>=8,typename unpacket_traits<SLhsPacket>::half,SRhsPacket>::type SRhsPacketHalf;
      |                                                                                                                                       ^~~~~~~~~~~~~~
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:1595:135: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__vector(2) double’} [-Wignored-attributes]
 1595 |               typedef typename conditional<SwappedTraits::LhsProgress>=8,typename unpacket_traits<SAccPacket>::half,SAccPacket>::type SAccPacketHalf;
      |                                                                                                                                       ^~~~~~~~~~~~~~
In file included from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Core:439,
                 from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
                 from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
                 from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
                 from mm.cpp:5:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Block<const Eigen::Map<Eigen::Matrix<double, -1, -1> >, 1, -1, false>, 0>’:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:478:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<const Eigen::Map<Eigen::Matrix<double, -1, -1> >, 1, -1, false>, 2>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::Block<const Eigen::Map<Eigen::Matrix<double, -1, -1> >, 1, -1, false> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::Block<const Eigen::Map<Eigen::Matrix<double, -1, -1> >, 1, -1, false> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34:   required from ‘class Eigen::MapBase<Eigen::Block<const Eigen::Map<Eigen::Matrix<double, -1, -1> >, 1, -1, false>, 0>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Block.h:329:7:   required from ‘class Eigen::internal::BlockImpl_dense<const Eigen::Map<Eigen::Matrix<double, -1, -1> >, 1, -1, false, true>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Block.h:154:7:   [ skipping 11 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:148:43:   required from ‘static void Eigen::internal::Assignment<DstXprType, Eigen::Product<Lhs, Rhs, Options>, Eigen::internal::assign_op<Scalar, Scalar>, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == Eigen::DefaultProduct) || (Options == Eigen::AliasFreeProduct))>::type>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op<Scalar, Scalar>&) [with DstXprType = Eigen::Matrix<double, -1, -1>; Lhs = Eigen::Map<Eigen::Matrix<double, -1, -1> >; Rhs = Eigen::Map<Eigen::Matrix<double, -1, -1> >; int Options = 0; Scalar = double; Eigen::internal::Assignment<DstXprType, Eigen::Product<Lhs, Rhs, Options>, Eigen::internal::assign_op<Scalar, Scalar>, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == Eigen::DefaultProduct) || (Options == Eigen::AliasFreeProduct))>::type>::SrcXprType = Eigen::Product<Eigen::Map<Eigen::Matrix<double, -1, -1> >, Eigen::Map<Eigen::Matrix<double, -1, -1> >, 0>]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49:   required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix<double, -1, -1>; Src = Eigen::Product<Eigen::Map<Eigen::Matrix<double, -1, -1> >, Eigen::Map<Eigen::Matrix<double, -1, -1> >, 0>; Func = Eigen::internal::assign_op<double, double>]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:732:41:   required from ‘Derived& Eigen::PlainObjectBase<Derived>::_set_noalias(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::Product<Eigen::Map<Eigen::Matrix<double, -1, -1> >, Eigen::Map<Eigen::Matrix<double, -1, -1> >, 0>; Derived = Eigen::Matrix<double, -1, -1>]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:537:7:   required from ‘Eigen::PlainObjectBase<Derived>::PlainObjectBase(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::Product<Eigen::Map<Eigen::Matrix<double, -1, -1> >, Eigen::Map<Eigen::Matrix<double, -1, -1> >, 0>; Derived = Eigen::Matrix<double, -1, -1>]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:377:29:   required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase<OtherDerived>&) [with OtherDerived = Eigen::Product<Eigen::Map<Eigen::Matrix<double, -1, -1> >, Eigen::Map<Eigen::Matrix<double, -1, -1> >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’
mm.cpp:10:29:   required from here
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
   55 |                      >::type PacketReturnType;
      |                              ^~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Transpose<const Eigen::Block<const Eigen::Map<Eigen::Matrix<double, -1, -1> >, 1, -1, false> >, 0>’:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:478:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Transpose<const Eigen::Block<const Eigen::Map<Eigen::Matrix<double, -1, -1> >, 1, -1, false> >, 2>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::Transpose<const Eigen::Block<const Eigen::Map<Eigen::Matrix<double, -1, -1> >, 1, -1, false> > >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::Transpose<const Eigen::Block<const Eigen::Map<Eigen::Matrix<double, -1, -1> >, 1, -1, false> > >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:115:37:   required from ‘class Eigen::TransposeImpl<const Eigen::Block<const Eigen::Map<Eigen::Matrix<double, -1, -1> >, 1, -1, false>, Eigen::Dense>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37:   required from ‘class Eigen::Transpose<const Eigen::Block<const Eigen::Map<Eigen::Matrix<double, -1, -1> >, 1, -1, false> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:578:40:   [ skipping 9 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:148:43:   required from ‘static void Eigen::internal::Assignment<DstXprType, Eigen::Product<Lhs, Rhs, Options>, Eigen::internal::assign_op<Scalar, Scalar>, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == Eigen::DefaultProduct) || (Options == Eigen::AliasFreeProduct))>::type>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op<Scalar, Scalar>&) [with DstXprType = Eigen::Matrix<double, -1, -1>; Lhs = Eigen::Map<Eigen::Matrix<double, -1, -1> >; Rhs = Eigen::Map<Eigen::Matrix<double, -1, -1> >; int Options = 0; Scalar = double; Eigen::internal::Assignment<DstXprType, Eigen::Product<Lhs, Rhs, Options>, Eigen::internal::assign_op<Scalar, Scalar>, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == Eigen::DefaultProduct) || (Options == Eigen::AliasFreeProduct))>::type>::SrcXprType = Eigen::Product<Eigen::Map<Eigen::Matrix<double, -1, -1> >, Eigen::Map<Eigen::Matrix<double, -1, -1> >, 0>]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49:   required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix<double, -1, -1>; Src = Eigen::Product<Eigen::Map<Eigen::Matrix<double, -1, -1> >, Eigen::Map<Eigen::Matrix<double, -1, -1> >, 0>; Func = Eigen::internal::assign_op<double, double>]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:732:41:   required from ‘Derived& Eigen::PlainObjectBase<Derived>::_set_noalias(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::Product<Eigen::Map<Eigen::Matrix<double, -1, -1> >, Eigen::Map<Eigen::Matrix<double, -1, -1> >, 0>; Derived = Eigen::Matrix<double, -1, -1>]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:537:7:   required from ‘Eigen::PlainObjectBase<Derived>::PlainObjectBase(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::Product<Eigen::Map<Eigen::Matrix<double, -1, -1> >, Eigen::Map<Eigen::Matrix<double, -1, -1> >, 0>; Derived = Eigen::Matrix<double, -1, -1>]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:377:29:   required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase<OtherDerived>&) [with OtherDerived = Eigen::Product<Eigen::Map<Eigen::Matrix<double, -1, -1> >, Eigen::Map<Eigen::Matrix<double, -1, -1> >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’
mm.cpp:10:29:   required from here
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Block<const Eigen::Map<Eigen::Matrix<double, -1, -1> >, -1, 1, true>, 0>’:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:478:7:   required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<const Eigen::Map<Eigen::Matrix<double, -1, -1> >, -1, 1, true>, 2>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::Block<const Eigen::Map<Eigen::Matrix<double, -1, -1> >, -1, 1, true> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::Block<const Eigen::Map<Eigen::Matrix<double, -1, -1> >, -1, 1, true> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34:   required from ‘class Eigen::MapBase<Eigen::Block<const Eigen::Map<Eigen::Matrix<double, -1, -1> >, -1, 1, true>, 0>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Block.h:329:7:   required from ‘class Eigen::internal::BlockImpl_dense<const Eigen::Map<Eigen::Matrix<double, -1, -1> >, -1, 1, true, true>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Block.h:154:7:   [ skipping 11 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:148:43:   required from ‘static void Eigen::internal::Assignment<DstXprType, Eigen::Product<Lhs, Rhs, Options>, Eigen::internal::assign_op<Scalar, Scalar>, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == Eigen::DefaultProduct) || (Options == Eigen::AliasFreeProduct))>::type>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op<Scalar, Scalar>&) [with DstXprType = Eigen::Matrix<double, -1, -1>; Lhs = Eigen::Map<Eigen::Matrix<double, -1, -1> >; Rhs = Eigen::Map<Eigen::Matrix<double, -1, -1> >; int Options = 0; Scalar = double; Eigen::internal::Assignment<DstXprType, Eigen::Product<Lhs, Rhs, Options>, Eigen::internal::assign_op<Scalar, Scalar>, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == Eigen::DefaultProduct) || (Options == Eigen::AliasFreeProduct))>::type>::SrcXprType = Eigen::Product<Eigen::Map<Eigen::Matrix<double, -1, -1> >, Eigen::Map<Eigen::Matrix<double, -1, -1> >, 0>]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49:   required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix<double, -1, -1>; Src = Eigen::Product<Eigen::Map<Eigen::Matrix<double, -1, -1> >, Eigen::Map<Eigen::Matrix<double, -1, -1> >, 0>; Func = Eigen::internal::assign_op<double, double>]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:732:41:   required from ‘Derived& Eigen::PlainObjectBase<Derived>::_set_noalias(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::Product<Eigen::Map<Eigen::Matrix<double, -1, -1> >, Eigen::Map<Eigen::Matrix<double, -1, -1> >, 0>; Derived = Eigen::Matrix<double, -1, -1>]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:537:7:   required from ‘Eigen::PlainObjectBase<Derived>::PlainObjectBase(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::Product<Eigen::Map<Eigen::Matrix<double, -1, -1> >, Eigen::Map<Eigen::Matrix<double, -1, -1> >, 0>; Derived = Eigen::Matrix<double, -1, -1>]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:377:29:   required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase<OtherDerived>&) [with OtherDerived = Eigen::Product<Eigen::Map<Eigen::Matrix<double, -1, -1> >, Eigen::Map<Eigen::Matrix<double, -1, -1> >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’
mm.cpp:10:29:   required from here
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::Transpose<const Eigen::Block<const Eigen::Map<Eigen::Matrix<double, -1, -1> >, 1, -1, false> >, const Eigen::Block<const Eigen::Map<Eigen::Matrix<double, -1, -1> >, -1, 1, true> >, 0>’:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34:   required from ‘class Eigen::DenseBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::Transpose<const Eigen::Block<const Eigen::Map<Eigen::Matrix<double, -1, -1> >, 1, -1, false> >, const Eigen::Block<const Eigen::Map<Eigen::Matrix<double, -1, -1> >, -1, 1, true> > >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34:   required from ‘class Eigen::MatrixBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::Transpose<const Eigen::Block<const Eigen::Map<Eigen::Matrix<double, -1, -1> >, 1, -1, false> >, const Eigen::Block<const Eigen::Map<Eigen::Matrix<double, -1, -1> >, -1, 1, true> > >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7:   required from ‘class Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_product_op<double, double>, const Eigen::Transpose<const Eigen::Block<const Eigen::Map<Eigen::Matrix<double, -1, -1> >, 1, -1, false> >, const Eigen::Block<const Eigen::Map<Eigen::Matrix<double, -1, -1> >, -1, 1, true>, Eigen::Dense>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7:   required from ‘class Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::Transpose<const Eigen::Block<const Eigen::Map<Eigen::Matrix<double, -1, -1> >, 1, -1, false> >, const Eigen::Block<const Eigen::Map<Eigen::Matrix<double, -1, -1> >, -1, 1, true> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:578:72:   required from ‘const CoeffReturnType Eigen::internal::product_evaluator<Eigen::Product<Lhs, Rhs, 1>, ProductTag, Eigen::DenseShape, Eigen::DenseShape>::coeff(Eigen::Index, Eigen::Index) const [with Lhs = Eigen::Map<Eigen::Matrix<double, -1, -1> >; Rhs = Eigen::Map<Eigen::Matrix<double, -1, -1> >; int ProductTag = 8; typename Eigen::internal::traits<typename Eigen::Product<Lhs, Rhs, 1>::Rhs>::Scalar = double; typename Eigen::internal::traits<typename Eigen::Product<Lhs, Rhs, 1>::Lhs>::Scalar = double; Eigen::internal::product_evaluator<Eigen::Product<Lhs, Rhs, 1>, ProductTag, Eigen::DenseShape, Eigen::DenseShape>::CoeffReturnType = double; Eigen::Index = long int]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:631:5:   [ skipping 8 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:148:43:   required from ‘static void Eigen::internal::Assignment<DstXprType, Eigen::Product<Lhs, Rhs, Options>, Eigen::internal::assign_op<Scalar, Scalar>, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == Eigen::DefaultProduct) || (Options == Eigen::AliasFreeProduct))>::type>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op<Scalar, Scalar>&) [with DstXprType = Eigen::Matrix<double, -1, -1>; Lhs = Eigen::Map<Eigen::Matrix<double, -1, -1> >; Rhs = Eigen::Map<Eigen::Matrix<double, -1, -1> >; int Options = 0; Scalar = double; Eigen::internal::Assignment<DstXprType, Eigen::Product<Lhs, Rhs, Options>, Eigen::internal::assign_op<Scalar, Scalar>, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == Eigen::DefaultProduct) || (Options == Eigen::AliasFreeProduct))>::type>::SrcXprType = Eigen::Product<Eigen::Map<Eigen::Matrix<double, -1, -1> >, Eigen::Map<Eigen::Matrix<double, -1, -1> >, 0>]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49:   required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix<double, -1, -1>; Src = Eigen::Product<Eigen::Map<Eigen::Matrix<double, -1, -1> >, Eigen::Map<Eigen::Matrix<double, -1, -1> >, 0>; Func = Eigen::internal::assign_op<double, double>]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:732:41:   required from ‘Derived& Eigen::PlainObjectBase<Derived>::_set_noalias(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::Product<Eigen::Map<Eigen::Matrix<double, -1, -1> >, Eigen::Map<Eigen::Matrix<double, -1, -1> >, 0>; Derived = Eigen::Matrix<double, -1, -1>]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:537:7:   required from ‘Eigen::PlainObjectBase<Derived>::PlainObjectBase(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::Product<Eigen::Map<Eigen::Matrix<double, -1, -1> >, Eigen::Map<Eigen::Matrix<double, -1, -1> >, 0>; Derived = Eigen::Matrix<double, -1, -1>]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:377:29:   required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase<OtherDerived>&) [with OtherDerived = Eigen::Product<Eigen::Map<Eigen::Matrix<double, -1, -1> >, Eigen::Map<Eigen::Matrix<double, -1, -1> >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’
mm.cpp:10:29:   required from here
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
In file included from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Core:445,
                 from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/Dense:1,
                 from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigenForward.h:30,
                 from /home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/RcppEigen.h:25,
                 from mm.cpp:5:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator<Eigen::Block<const Eigen::Map<Eigen::Matrix<double, -1, -1> >, 1, -1, false> >’:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:99:8:   required from ‘struct Eigen::internal::evaluator<const Eigen::Block<const Eigen::Map<Eigen::Matrix<double, -1, -1> >, 1, -1, false> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:269:8:   required from ‘struct Eigen::internal::unary_evaluator<Eigen::Transpose<const Eigen::Block<const Eigen::Map<Eigen::Matrix<double, -1, -1> >, 1, -1, false> >, Eigen::internal::IndexBased, double>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:90:8:   required from ‘struct Eigen::internal::evaluator<Eigen::Transpose<const Eigen::Block<const Eigen::Map<Eigen::Matrix<double, -1, -1> >, 1, -1, false> > >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:99:8:   required from ‘struct Eigen::internal::evaluator<const Eigen::Transpose<const Eigen::Block<const Eigen::Map<Eigen::Matrix<double, -1, -1> >, 1, -1, false> > >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:681:51:   required from ‘struct Eigen::internal::binary_evaluator<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::Transpose<const Eigen::Block<const Eigen::Map<Eigen::Matrix<double, -1, -1> >, 1, -1, false> >, const Eigen::Block<const Eigen::Map<Eigen::Matrix<double, -1, -1> >, -1, 1, true> >, Eigen::internal::IndexBased, Eigen::internal::IndexBased, double, double>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:665:8:   [ skipping 13 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:148:43:   required from ‘static void Eigen::internal::Assignment<DstXprType, Eigen::Product<Lhs, Rhs, Options>, Eigen::internal::assign_op<Scalar, Scalar>, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == Eigen::DefaultProduct) || (Options == Eigen::AliasFreeProduct))>::type>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op<Scalar, Scalar>&) [with DstXprType = Eigen::Matrix<double, -1, -1>; Lhs = Eigen::Map<Eigen::Matrix<double, -1, -1> >; Rhs = Eigen::Map<Eigen::Matrix<double, -1, -1> >; int Options = 0; Scalar = double; Eigen::internal::Assignment<DstXprType, Eigen::Product<Lhs, Rhs, Options>, Eigen::internal::assign_op<Scalar, Scalar>, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == Eigen::DefaultProduct) || (Options == Eigen::AliasFreeProduct))>::type>::SrcXprType = Eigen::Product<Eigen::Map<Eigen::Matrix<double, -1, -1> >, Eigen::Map<Eigen::Matrix<double, -1, -1> >, 0>]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49:   required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix<double, -1, -1>; Src = Eigen::Product<Eigen::Map<Eigen::Matrix<double, -1, -1> >, Eigen::Map<Eigen::Matrix<double, -1, -1> >, 0>; Func = Eigen::internal::assign_op<double, double>]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:732:41:   required from ‘Derived& Eigen::PlainObjectBase<Derived>::_set_noalias(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::Product<Eigen::Map<Eigen::Matrix<double, -1, -1> >, Eigen::Map<Eigen::Matrix<double, -1, -1> >, 0>; Derived = Eigen::Matrix<double, -1, -1>]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:537:7:   required from ‘Eigen::PlainObjectBase<Derived>::PlainObjectBase(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::Product<Eigen::Map<Eigen::Matrix<double, -1, -1> >, Eigen::Map<Eigen::Matrix<double, -1, -1> >, 0>; Derived = Eigen::Matrix<double, -1, -1>]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:377:29:   required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase<OtherDerived>&) [with OtherDerived = Eigen::Product<Eigen::Map<Eigen::Matrix<double, -1, -1> >, Eigen::Map<Eigen::Matrix<double, -1, -1> >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’
mm.cpp:10:29:   required from here
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:960:8: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
  960 |   enum {
      |        ^
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator<Eigen::Block<const Eigen::Map<Eigen::Matrix<double, -1, -1> >, -1, 1, true> >’:
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:99:8:   required from ‘struct Eigen::internal::evaluator<const Eigen::Block<const Eigen::Map<Eigen::Matrix<double, -1, -1> >, -1, 1, true> >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:681:51:   required from ‘struct Eigen::internal::binary_evaluator<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::Transpose<const Eigen::Block<const Eigen::Map<Eigen::Matrix<double, -1, -1> >, 1, -1, false> >, const Eigen::Block<const Eigen::Map<Eigen::Matrix<double, -1, -1> >, -1, 1, true> >, Eigen::internal::IndexBased, Eigen::internal::IndexBased, double, double>’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:665:8:   required from ‘struct Eigen::internal::evaluator<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::Transpose<const Eigen::Block<const Eigen::Map<Eigen::Matrix<double, -1, -1> >, 1, -1, false> >, const Eigen::Block<const Eigen::Map<Eigen::Matrix<double, -1, -1> >, -1, 1, true> > >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:349:39:   required from ‘class Eigen::internal::redux_evaluator<Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::Transpose<const Eigen::Block<const Eigen::Map<Eigen::Matrix<double, -1, -1> >, 1, -1, false> >, const Eigen::Block<const Eigen::Map<Eigen::Matrix<double, -1, -1> >, -1, 1, true> > >’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:416:17:   required from ‘typename Eigen::internal::traits<T>::Scalar Eigen::DenseBase<Derived>::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op<double, double>; Derived = Eigen::CwiseBinaryOp<Eigen::internal::scalar_product_op<double, double>, const Eigen::Transpose<const Eigen::Block<const Eigen::Map<Eigen::Matrix<double, -1, -1> >, 1, -1, false> >, const Eigen::Block<const Eigen::Map<Eigen::Matrix<double, -1, -1> >, -1, 1, true> >; typename Eigen::internal::traits<T>::Scalar = double]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:453:73:   [ skipping 10 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:148:43:   required from ‘static void Eigen::internal::Assignment<DstXprType, Eigen::Product<Lhs, Rhs, Options>, Eigen::internal::assign_op<Scalar, Scalar>, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == Eigen::DefaultProduct) || (Options == Eigen::AliasFreeProduct))>::type>::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op<Scalar, Scalar>&) [with DstXprType = Eigen::Matrix<double, -1, -1>; Lhs = Eigen::Map<Eigen::Matrix<double, -1, -1> >; Rhs = Eigen::Map<Eigen::Matrix<double, -1, -1> >; int Options = 0; Scalar = double; Eigen::internal::Assignment<DstXprType, Eigen::Product<Lhs, Rhs, Options>, Eigen::internal::assign_op<Scalar, Scalar>, Eigen::internal::Dense2Dense, typename Eigen::internal::enable_if<((Options == Eigen::DefaultProduct) || (Options == Eigen::AliasFreeProduct))>::type>::SrcXprType = Eigen::Product<Eigen::Map<Eigen::Matrix<double, -1, -1> >, Eigen::Map<Eigen::Matrix<double, -1, -1> >, 0>]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49:   required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix<double, -1, -1>; Src = Eigen::Product<Eigen::Map<Eigen::Matrix<double, -1, -1> >, Eigen::Map<Eigen::Matrix<double, -1, -1> >, 0>; Func = Eigen::internal::assign_op<double, double>]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:732:41:   required from ‘Derived& Eigen::PlainObjectBase<Derived>::_set_noalias(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::Product<Eigen::Map<Eigen::Matrix<double, -1, -1> >, Eigen::Map<Eigen::Matrix<double, -1, -1> >, 0>; Derived = Eigen::Matrix<double, -1, -1>]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:537:7:   required from ‘Eigen::PlainObjectBase<Derived>::PlainObjectBase(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::Product<Eigen::Map<Eigen::Matrix<double, -1, -1> >, Eigen::Map<Eigen::Matrix<double, -1, -1> >, 0>; Derived = Eigen::Matrix<double, -1, -1>]’
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:377:29:   required from ‘Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase<OtherDerived>&) [with OtherDerived = Eigen::Product<Eigen::Map<Eigen::Matrix<double, -1, -1> >, Eigen::Map<Eigen::Matrix<double, -1, -1> >, 0>; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]’
mm.cpp:10:29:   required from here
/home/biocbuild/bbs-3.14-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:960:8: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__vector(2) double’} [-Wignored-attributes]
g++ -std=gnu++14 -shared -L/home/biocbuild/bbs-3.14-bioc/R/lib -L/usr/local/lib -o mnem.so RcppExports.o mm.o -L/home/biocbuild/bbs-3.14-bioc/R/lib -lR
installing to /home/biocbuild/bbs-3.14-bioc/R/library/00LOCK-mnem/00new/mnem/libs
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (mnem)

Tests output

mnem.Rcheck/tests/runTests.Rout


R version 4.1.3 (2022-03-10) -- "One Push-Up"
Copyright (C) 2022 The R Foundation for Statistical Computing
Platform: x86_64-pc-linux-gnu (64-bit)

R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.

R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.

Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
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> BiocGenerics:::testPackage("mnem")


RUNIT TEST PROTOCOL -- Tue Apr 12 08:19:41 2022 
*********************************************** 
Number of test functions: 0 
Number of errors: 0 
Number of failures: 0 

 
1 Test Suite : 
mnem RUnit Tests - 0 test functions, 0 errors, 0 failures
Number of test functions: 0 
Number of errors: 0 
Number of failures: 0 
> 
> proc.time()
   user  system elapsed 
  4.342   0.306   4.630 

Example timings

mnem.Rcheck/mnem-Ex.timings

nameusersystemelapsed
app0.0000.0020.002
bootstrap0.2840.0130.297
clustNEM1.1580.0441.202
createApp0.0010.0000.001
fitacc0.1970.0000.197
fuzzyindex0.0180.0040.021
getAffinity0.1870.0440.231
getIC0.2190.0000.219
hamSim0.0030.0000.003
mnem0.1920.0000.191
mnemh0.0380.0000.039
mnemk0.2120.0000.212
nem0.0010.0000.001
plot.bootmnem0.3770.0200.396
plot.mnem0.3610.0040.366
plot.mnem_mcmc0.2630.0320.295
plot.mnem_sim0.0610.0040.065
plotConvergence0.20.00.2
plotConvergence.mnem0.1960.0000.195
plotDnf0.0380.0000.038
scoreAdj0.0000.0020.001
simData0.0000.0040.003
transitive.closure0.0000.0000.001
transitive.reduction0.0000.0000.001