Back to Multiple platform build/check report for BioC 3.14
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This page was generated on 2022-04-13 12:06:48 -0400 (Wed, 13 Apr 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 20.04.4 LTS)x86_644.1.3 (2022-03-10) -- "One Push-Up" 4324
tokay2Windows Server 2012 R2 Standardx644.1.3 (2022-03-10) -- "One Push-Up" 4077
machv2macOS 10.14.6 Mojavex86_644.1.3 (2022-03-10) -- "One Push-Up" 4137
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

INSTALL results for logicFS on tokay2


To the developers/maintainers of the logicFS package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/logicFS.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 1009/2083HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
logicFS 2.14.0  (landing page)
Holger Schwender
Snapshot Date: 2022-04-12 01:55:07 -0400 (Tue, 12 Apr 2022)
git_url: https://git.bioconductor.org/packages/logicFS
git_branch: RELEASE_3_14
git_last_commit: 397925a
git_last_commit_date: 2021-10-26 11:49:44 -0400 (Tue, 26 Oct 2021)
nebbiolo2Linux (Ubuntu 20.04.4 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
tokay2Windows Server 2012 R2 Standard / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
machv2macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: logicFS
Version: 2.14.0
Command: C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/logicFS_2.14.0.tar.gz && rm -rf logicFS.buildbin-libdir && mkdir logicFS.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=logicFS.buildbin-libdir logicFS_2.14.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL logicFS_2.14.0.zip && rm logicFS_2.14.0.tar.gz logicFS_2.14.0.zip
StartedAt: 2022-04-12 04:07:51 -0400 (Tue, 12 Apr 2022)
EndedAt: 2022-04-12 04:09:20 -0400 (Tue, 12 Apr 2022)
EllapsedTime: 89.2 seconds
RetCode: 0
Status:   OK  

Command output

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/logicFS_2.14.0.tar.gz && rm -rf logicFS.buildbin-libdir && mkdir logicFS.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=logicFS.buildbin-libdir logicFS_2.14.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL logicFS_2.14.0.zip && rm logicFS_2.14.0.tar.gz logicFS_2.14.0.zip
###
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##############################################################################


  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
 16  195k   16 32211    0     0   205k      0 --:--:-- --:--:-- --:--:--  205k
100  195k  100  195k    0     0   474k      0 --:--:-- --:--:-- --:--:--  474k

install for i386

* installing *source* package 'logicFS' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'logicFS'
    finding HTML links ... done
    data.logicfs                            html  
    getMatEval                              html  
    logic.bagging                           html  
    logic.oob                               html  
    logic.pimp                              html  
    finding level-2 HTML links ... done

    logicFS-internal                        html  
    logicFS                                 html  
    make.snp.dummy                          html  
    mlogreg                                 html  
    plot.logicFS                            html  
    plot.predict.survivalFS                 html  
    predict.logicBagg                       html  
    predict.mlogreg                         html  
    print.logicFS                           html  
    survivalFS                              html  
    vim.approxPval                          html  
    vim.chisq                               html  
    vim.ebam                                html  
    vim.individual                          html  
    vim.logicFS                             html  
    vim.norm                                html  
    vim.permSet                             html  
    vim.set                                 html  
** building package indices
** installing vignettes
   'logicFS.Rnw' 
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'logicFS' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'logicFS' as logicFS_2.14.0.zip
* DONE (logicFS)
* installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library'
package 'logicFS' successfully unpacked and MD5 sums checked