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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/gpuMagic_1.10.0.tar.gz && rm -rf gpuMagic.buildbin-libdir && mkdir gpuMagic.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=gpuMagic.buildbin-libdir gpuMagic_1.10.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL gpuMagic_1.10.0.zip && rm gpuMagic_1.10.0.tar.gz gpuMagic_1.10.0.zip
###
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install for i386

* installing *source* package 'gpuMagic' ...
** using staged installation
** libs
entered
"C:/rtools40/mingw32/bin/"g++  -std=gnu++11 -I"C:/Users/BIOCBU~1/BBS-3~1.14-/R/include" -DNDEBUG -IC:/Users/BIOCBU~1/BBS-3~1.14-/R/include -I../inst/include/OpenCL_header -DCL_TARGET_OPENCL_VERSION=220 -DCL_USE_DEPRECATED_OPENCL_1_2_APIS -I'C:/Users/biocbuild/bbs-3.14-bioc/R/library/Rcpp/include'   -I"C:/extsoft/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c C_Interface.cpp -o C_Interface.o
"C:/rtools40/mingw32/bin/"g++  -std=gnu++11 -I"C:/Users/BIOCBU~1/BBS-3~1.14-/R/include" -DNDEBUG -IC:/Users/BIOCBU~1/BBS-3~1.14-/R/include -I../inst/include/OpenCL_header -DCL_TARGET_OPENCL_VERSION=220 -DCL_USE_DEPRECATED_OPENCL_1_2_APIS -I'C:/Users/biocbuild/bbs-3.14-bioc/R/library/Rcpp/include'   -I"C:/extsoft/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c R_functionRegistration.cpp -o R_functionRegistration.o
"C:/rtools40/mingw32/bin/"g++  -std=gnu++11 -I"C:/Users/BIOCBU~1/BBS-3~1.14-/R/include" -DNDEBUG -IC:/Users/BIOCBU~1/BBS-3~1.14-/R/include -I../inst/include/OpenCL_header -DCL_TARGET_OPENCL_VERSION=220 -DCL_USE_DEPRECATED_OPENCL_1_2_APIS -I'C:/Users/biocbuild/bbs-3.14-bioc/R/library/Rcpp/include'   -I"C:/extsoft/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c Tools.cpp -o Tools.o
"C:/rtools40/mingw32/bin/"g++  -std=gnu++11 -I"C:/Users/BIOCBU~1/BBS-3~1.14-/R/include" -DNDEBUG -IC:/Users/BIOCBU~1/BBS-3~1.14-/R/include -I../inst/include/OpenCL_header -DCL_TARGET_OPENCL_VERSION=220 -DCL_USE_DEPRECATED_OPENCL_1_2_APIS -I'C:/Users/biocbuild/bbs-3.14-bioc/R/library/Rcpp/include'   -I"C:/extsoft/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c kernelManager.cpp -o kernelManager.o
"C:/rtools40/mingw32/bin/"g++  -std=gnu++11 -I"C:/Users/BIOCBU~1/BBS-3~1.14-/R/include" -DNDEBUG -IC:/Users/BIOCBU~1/BBS-3~1.14-/R/include -I../inst/include/OpenCL_header -DCL_TARGET_OPENCL_VERSION=220 -DCL_USE_DEPRECATED_OPENCL_1_2_APIS -I'C:/Users/biocbuild/bbs-3.14-bioc/R/library/Rcpp/include'   -I"C:/extsoft/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c openArray.cpp -o openArray.o
cd ./ICD_loader && mkdir -p ./i386 && /usr/bin/make ./i386/libOpenCL.a \
CC=""C:/rtools40/mingw32/bin/"gcc " CFLAGS="    -O2 -Wall  -std=gnu99 -mfpmath=sse -msse2 -mstackrealign " AR=""C:/rtools40/mingw32/bin/"ar" RM="rm -f" OPENCL_INC="../../inst/include/OpenCL_header" \
ICD_OS=icd_windows
make[1]: Entering directory '/c/Users/biocbuild/bbs-3.14-bioc/tmpdir/RtmpmYwa90/R.INSTALLed07a6c5b/gpuMagic/src/ICD_loader'
C:/rtools40/mingw32/bin/gcc  -I../../inst/include/OpenCL_header -DCL_TARGET_OPENCL_VERSION=220 -O2 -Wall  -std=gnu99 -mfpmath=sse -msse2 -mstackrealign  -c icd.c -o i386/icd.o
C:/rtools40/mingw32/bin/gcc  -I../../inst/include/OpenCL_header -DCL_TARGET_OPENCL_VERSION=220 -O2 -Wall  -std=gnu99 -mfpmath=sse -msse2 -mstackrealign  -c icd_dispatch.c -o i386/icd_dispatch.o
C:/rtools40/mingw32/bin/gcc  -I../../inst/include/OpenCL_header -DCL_TARGET_OPENCL_VERSION=220 -O2 -Wall  -std=gnu99 -mfpmath=sse -msse2 -mstackrealign  -c icd_windows.c -o i386/icd_windows.o
rm -f i386/libOpenCL.a
C:/rtools40/mingw32/bin/ar rcs i386/libOpenCL.a i386/icd.o i386/icd_dispatch.o i386/icd_windows.o
make[1]: Leaving directory '/c/Users/biocbuild/bbs-3.14-bioc/tmpdir/RtmpmYwa90/R.INSTALLed07a6c5b/gpuMagic/src/ICD_loader'
C:/rtools40/mingw32/bin/g++ -shared -s -static-libgcc -o gpuMagic.dll tmp.def C_Interface.o R_functionRegistration.o Tools.o kernelManager.o openArray.o ./ICD_loader/i386/libOpenCL.a -LC:/extsoft/lib/i386 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.14-/R/bin/i386 -lR
installing to C:/Users/biocbuild/bbs-3.14-bioc/meat/gpuMagic.buildbin-libdir/00LOCK-gpuMagic/00new/gpuMagic/libs/i386
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'gpuMagic'
    finding HTML links ... done
    DeviceInfo                              html  
    Matrix                                  html  
    Scalar                                  html  
    as.matrix.gpuMatrix                     html  
    as.vector.gpuMatrix                     html  
    compileGPUCode                          html  
    dot-kernel                              html  
    extract-methods                         html  
    gpuMagic.getAvailableType               html  
    gpuMagic.getMemUsage                    html  
    gpuMagic.getOptions                     html  
    gpuMagic.setOptions                     html  
    gpuMatrix                               html  
    gpuSapply                               html  
    gpuSapply.getOption                     html  
    internalFunctions                       html  
    kernel.getOption                        html  
    ncol-gpuMatrix-method                   html  
    no_copy_method                          html  
    printFunctions                          html  
    subRef                                  html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
No device has been found, please make sure the computer has a graphic card or the driver has been properly installed.
Hint:
For CPU, you can install the intel's / ATI's graphic driver for the intel's / AMD's CPU respectively.
For GPU, you need to download the graphic driver from your vendor's website.
** testing if installed package can be loaded from final location
No device has been found, please make sure the computer has a graphic card or the driver has been properly installed.
Hint:
For CPU, you can install the intel's / ATI's graphic driver for the intel's / AMD's CPU respectively.
For GPU, you need to download the graphic driver from your vendor's website.
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'gpuMagic' ...
** libs
entered
"C:/rtools40/mingw64/bin/"g++  -std=gnu++11 -I"C:/Users/BIOCBU~1/BBS-3~1.14-/R/include" -DNDEBUG -IC:/Users/BIOCBU~1/BBS-3~1.14-/R/include -I../inst/include/OpenCL_header -DCL_TARGET_OPENCL_VERSION=220 -DCL_USE_DEPRECATED_OPENCL_1_2_APIS -I'C:/Users/biocbuild/bbs-3.14-bioc/R/library/Rcpp/include'   -I"C:/extsoft/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c C_Interface.cpp -o C_Interface.o
"C:/rtools40/mingw64/bin/"g++  -std=gnu++11 -I"C:/Users/BIOCBU~1/BBS-3~1.14-/R/include" -DNDEBUG -IC:/Users/BIOCBU~1/BBS-3~1.14-/R/include -I../inst/include/OpenCL_header -DCL_TARGET_OPENCL_VERSION=220 -DCL_USE_DEPRECATED_OPENCL_1_2_APIS -I'C:/Users/biocbuild/bbs-3.14-bioc/R/library/Rcpp/include'   -I"C:/extsoft/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c R_functionRegistration.cpp -o R_functionRegistration.o
"C:/rtools40/mingw64/bin/"g++  -std=gnu++11 -I"C:/Users/BIOCBU~1/BBS-3~1.14-/R/include" -DNDEBUG -IC:/Users/BIOCBU~1/BBS-3~1.14-/R/include -I../inst/include/OpenCL_header -DCL_TARGET_OPENCL_VERSION=220 -DCL_USE_DEPRECATED_OPENCL_1_2_APIS -I'C:/Users/biocbuild/bbs-3.14-bioc/R/library/Rcpp/include'   -I"C:/extsoft/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c Tools.cpp -o Tools.o
"C:/rtools40/mingw64/bin/"g++  -std=gnu++11 -I"C:/Users/BIOCBU~1/BBS-3~1.14-/R/include" -DNDEBUG -IC:/Users/BIOCBU~1/BBS-3~1.14-/R/include -I../inst/include/OpenCL_header -DCL_TARGET_OPENCL_VERSION=220 -DCL_USE_DEPRECATED_OPENCL_1_2_APIS -I'C:/Users/biocbuild/bbs-3.14-bioc/R/library/Rcpp/include'   -I"C:/extsoft/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c kernelManager.cpp -o kernelManager.o
"C:/rtools40/mingw64/bin/"g++  -std=gnu++11 -I"C:/Users/BIOCBU~1/BBS-3~1.14-/R/include" -DNDEBUG -IC:/Users/BIOCBU~1/BBS-3~1.14-/R/include -I../inst/include/OpenCL_header -DCL_TARGET_OPENCL_VERSION=220 -DCL_USE_DEPRECATED_OPENCL_1_2_APIS -I'C:/Users/biocbuild/bbs-3.14-bioc/R/library/Rcpp/include'   -I"C:/extsoft/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c openArray.cpp -o openArray.o
cd ./ICD_loader && mkdir -p ./x64 && /usr/bin/make ./x64/libOpenCL.a \
CC=""C:/rtools40/mingw64/bin/"gcc " CFLAGS="    -O2 -Wall  -std=gnu99 -mfpmath=sse -msse2 -mstackrealign " AR=""C:/rtools40/mingw64/bin/"ar" RM="rm -f" OPENCL_INC="../../inst/include/OpenCL_header" \
ICD_OS=icd_windows
make[1]: Entering directory '/c/Users/biocbuild/bbs-3.14-bioc/tmpdir/RtmpEDduo2/R.INSTALLf703c2119ba/gpuMagic/src/ICD_loader'
C:/rtools40/mingw64/bin/gcc  -I../../inst/include/OpenCL_header -DCL_TARGET_OPENCL_VERSION=220 -O2 -Wall  -std=gnu99 -mfpmath=sse -msse2 -mstackrealign  -c icd.c -o x64/icd.o
C:/rtools40/mingw64/bin/gcc  -I../../inst/include/OpenCL_header -DCL_TARGET_OPENCL_VERSION=220 -O2 -Wall  -std=gnu99 -mfpmath=sse -msse2 -mstackrealign  -c icd_dispatch.c -o x64/icd_dispatch.o
C:/rtools40/mingw64/bin/gcc  -I../../inst/include/OpenCL_header -DCL_TARGET_OPENCL_VERSION=220 -O2 -Wall  -std=gnu99 -mfpmath=sse -msse2 -mstackrealign  -c icd_windows.c -o x64/icd_windows.o
rm -f x64/libOpenCL.a
C:/rtools40/mingw64/bin/ar rcs x64/libOpenCL.a x64/icd.o x64/icd_dispatch.o x64/icd_windows.o
make[1]: Leaving directory '/c/Users/biocbuild/bbs-3.14-bioc/tmpdir/RtmpEDduo2/R.INSTALLf703c2119ba/gpuMagic/src/ICD_loader'
C:/rtools40/mingw64/bin/g++ -shared -s -static-libgcc -o gpuMagic.dll tmp.def C_Interface.o R_functionRegistration.o Tools.o kernelManager.o openArray.o ./ICD_loader/x64/libOpenCL.a -LC:/extsoft/lib/x64 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.14-/R/bin/x64 -lR
installing to C:/Users/biocbuild/bbs-3.14-bioc/meat/gpuMagic.buildbin-libdir/gpuMagic/libs/x64
** testing if installed package can be loaded
No device has been found, please make sure the computer has a graphic card or the driver has been properly installed.
Hint:
For CPU, you can install the intel's / ATI's graphic driver for the intel's / AMD's CPU respectively.
For GPU, you need to download the graphic driver from your vendor's website.
* MD5 sums
packaged installation of 'gpuMagic' as gpuMagic_1.10.0.zip
* DONE (gpuMagic)
* installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library'
package 'gpuMagic' successfully unpacked and MD5 sums checked