Back to Multiple platform build/check report for BioC 3.14
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This page was generated on 2022-04-13 12:06:31 -0400 (Wed, 13 Apr 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 20.04.4 LTS)x86_644.1.3 (2022-03-10) -- "One Push-Up" 4324
tokay2Windows Server 2012 R2 Standardx644.1.3 (2022-03-10) -- "One Push-Up" 4077
machv2macOS 10.14.6 Mojavex86_644.1.3 (2022-03-10) -- "One Push-Up" 4137
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

INSTALL results for epiNEM on tokay2


To the developers/maintainers of the epiNEM package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/epiNEM.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 593/2083HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
epiNEM 1.18.0  (landing page)
Martin Pirkl
Snapshot Date: 2022-04-12 01:55:07 -0400 (Tue, 12 Apr 2022)
git_url: https://git.bioconductor.org/packages/epiNEM
git_branch: RELEASE_3_14
git_last_commit: 1a58b62
git_last_commit_date: 2021-10-26 12:33:40 -0400 (Tue, 26 Oct 2021)
nebbiolo2Linux (Ubuntu 20.04.4 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
tokay2Windows Server 2012 R2 Standard / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
machv2macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: epiNEM
Version: 1.18.0
Command: C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/epiNEM_1.18.0.tar.gz && rm -rf epiNEM.buildbin-libdir && mkdir epiNEM.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=epiNEM.buildbin-libdir epiNEM_1.18.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL epiNEM_1.18.0.zip && rm epiNEM_1.18.0.tar.gz epiNEM_1.18.0.zip
StartedAt: 2022-04-12 07:32:03 -0400 (Tue, 12 Apr 2022)
EndedAt: 2022-04-12 07:33:03 -0400 (Tue, 12 Apr 2022)
EllapsedTime: 60.5 seconds
RetCode: 0
Status:   OK  

Command output

##############################################################################
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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/epiNEM_1.18.0.tar.gz && rm -rf epiNEM.buildbin-libdir && mkdir epiNEM.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=epiNEM.buildbin-libdir epiNEM_1.18.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL epiNEM_1.18.0.zip && rm epiNEM_1.18.0.tar.gz epiNEM_1.18.0.zip
###
##############################################################################
##############################################################################


  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
 47  198k   47 95661    0     0   463k      0 --:--:-- --:--:-- --:--:--  462k
100  198k  100  198k    0     0   585k      0 --:--:-- --:--:-- --:--:--  585k

install for i386

* installing *source* package 'epiNEM' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'epiNEM'
    finding HTML links ... done
    AddLogicGates                           html  
    CreateExtendedAdjacency                 html  
    CreateRandomGraph                       html  
    CreateTopology                          html  
    ExtendTopology                          html  
    GenerateData                            html  
    HeatmapOP                               html  
    Mll                                     html  
    SimEpiNEM                               html  
    epiAnno                                 html  
    epiNEM                                  html  
    epiScreen                               html  
    perm.rank.test                          html  
    plot.epiNEM                             html  
    plot.epiScreen                          html  
    plot.epiSim                             html  
    rank.enrichment                         html  
    sameith_GO                              html  
    sameith_string                          html  
    samscreen                               html  
    sim                                     html  
    wageningen_GO                           html  
    wageningen_string                       html  
    wagscreen                               html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'epiNEM' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'epiNEM' as epiNEM_1.18.0.zip
* DONE (epiNEM)
* installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library'
package 'epiNEM' successfully unpacked and MD5 sums checked