############################################################################## ############################################################################## ### ### Running command: ### ### C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/TIN_1.26.0.tar.gz && rm -rf TIN.buildbin-libdir && mkdir TIN.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=TIN.buildbin-libdir TIN_1.26.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL TIN_1.26.0.zip && rm TIN_1.26.0.tar.gz TIN_1.26.0.zip ### ############################################################################## ############################################################################## % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 3 4578k 3 148k 0 0 439k 0 0:00:10 --:--:-- 0:00:10 438k 28 4578k 28 1283k 0 0 959k 0 0:00:04 0:00:01 0:00:03 959k 73 4578k 73 3360k 0 0 1438k 0 0:00:03 0:00:02 0:00:01 1439k 100 4578k 100 4578k 0 0 1665k 0 0:00:02 0:00:02 --:--:-- 1665k install for i386 * installing *source* package 'TIN' ... ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading The following object is masked _by_ package:aroma.affymetrix: writeCdf The following object is masked from package:R.utils: findFiles ** help *** installing help indices converting help for package 'TIN' finding HTML links ... done aberrantExonUsage html clusterPlot html correlation html correlationPlot html firmaAnalysis html geneAnnotation html geneSetCorrelation html geneSets html posNegCorrPlot html probesetPermutations html readGeneSummaries html sampleSetFirmaScores html sampleSetGeneSummaries html scatterPlot html splicingFactors html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location The following object is masked _by_ package:aroma.affymetrix: writeCdf The following object is masked from package:R.utils: findFiles ** testing if installed package can be loaded from final location The following object is masked _by_ package:aroma.affymetrix: writeCdf The following object is masked from package:R.utils: findFiles ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'TIN' ... ** testing if installed package can be loaded The following object is masked _by_ package:aroma.affymetrix: writeCdf The following object is masked from package:R.utils: findFiles * MD5 sums packaged installation of 'TIN' as TIN_1.26.0.zip * DONE (TIN) * installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library' package 'TIN' successfully unpacked and MD5 sums checked