############################################################################## ############################################################################## ### ### Running command: ### ### C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/SCArray_1.2.1.tar.gz && rm -rf SCArray.buildbin-libdir && mkdir SCArray.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=SCArray.buildbin-libdir SCArray_1.2.1.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL SCArray_1.2.1.zip && rm SCArray_1.2.1.tar.gz SCArray_1.2.1.zip ### ############################################################################## ############################################################################## % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 100 973k 100 973k 0 0 1441k 0 --:--:-- --:--:-- --:--:-- 1444k install for i386 * installing *source* package 'SCArray' ... ** using staged installation ** libs "C:/rtools40/mingw32/bin/"g++ -std=gnu++11 -I"C:/Users/BIOCBU~1/BBS-3~1.14-/R/include" -DNDEBUG -I"C:/extsoft/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c scarray_main.cpp -o scarray_main.o C:/rtools40/mingw32/bin/g++ -std=gnu++11 -shared -s -static-libgcc -o SCArray.dll tmp.def scarray_main.o -LC:/extsoft/lib/i386 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.14-/R/bin/i386 -lR installing to C:/Users/biocbuild/bbs-3.14-bioc/meat/SCArray.buildbin-libdir/00LOCK-SCArray/00new/SCArray/libs/i386 ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'SCArray' finding HTML links ... done SCArray-package html scArray html finding level-2 HTML links ... done scClose html scConvGDS html scExperiment html scObj html scOpen html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'SCArray' ... ** libs "C:/rtools40/mingw64/bin/"g++ -std=gnu++11 -I"C:/Users/BIOCBU~1/BBS-3~1.14-/R/include" -DNDEBUG -I"C:/extsoft/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c scarray_main.cpp -o scarray_main.o C:/rtools40/mingw64/bin/g++ -std=gnu++11 -shared -s -static-libgcc -o SCArray.dll tmp.def scarray_main.o -LC:/extsoft/lib/x64 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.14-/R/bin/x64 -lR installing to C:/Users/biocbuild/bbs-3.14-bioc/meat/SCArray.buildbin-libdir/SCArray/libs/x64 ** testing if installed package can be loaded * MD5 sums packaged installation of 'SCArray' as SCArray_1.2.1.zip * DONE (SCArray) * installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library' package 'SCArray' successfully unpacked and MD5 sums checked