############################################################################## ############################################################################## ### ### Running command: ### ### C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/RCyjs_2.16.0.tar.gz && rm -rf RCyjs.buildbin-libdir && mkdir RCyjs.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=RCyjs.buildbin-libdir RCyjs_2.16.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL RCyjs_2.16.0.zip && rm RCyjs_2.16.0.tar.gz RCyjs_2.16.0.zip ### ############################################################################## ############################################################################## % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 80 892k 80 715k 0 0 1471k 0 --:--:-- --:--:-- --:--:-- 1472k 100 892k 100 892k 0 0 1591k 0 --:--:-- --:--:-- --:--:-- 1590k install for i386 * installing *source* package 'RCyjs' ... ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading Creating a new generic function for 'layout' in package 'RCyjs' ** help *** installing help indices converting help for package 'RCyjs' finding HTML links ... done RCyjs-class html addGraph html addGraphFromFile html clearSelection html createTestGaph html dataFramesToJSON html deleteGraph html deleteSelectedNodes html eda html edaNames html fit html fitSelection html getEdgeCount html getJSON html getLayoutStrategies html getNodeCount html getNodes html getPosition html getSelectedNodes html getSupportedEdgeDecoratorShapes html getSupportedNodeShapes html getZoom html graphNELtoJSON.string html hAlign html hideAllEdges html hideEdges html hideNodes html hideSelectedNodes html invertNodeSelection html layout html layoutSelectionInGrid html layoutSelectionInGridInferAnchorm html loadStyleFile html noa html noaNames html readAndStandardizeJSONNetworkFile html readAndStandardizeJSONStyleFile html redraw html restoreLayout html saveJPG html saveLayout html savePNG html selectFirstNeighborsOfSelectedNodes html selectNodes html setBackgroundColor html setDefaultEdgeColor html setDefaultEdgeLineColor html setDefaultEdgeLineStyle html setDefaultEdgeSourceArrowColor html setDefaultEdgeSourceArrowShape html setDefaultEdgeTargetArrowColor html setDefaultEdgeTargetArrowShape html setDefaultEdgeWidth html setDefaultNodeBorderColor html setDefaultNodeBorderWidth html setDefaultNodeColor html setDefaultNodeFontColor html setDefaultNodeFontSize html setDefaultNodeHeight html setDefaultNodeShape html setDefaultNodeSize html setDefaultNodeWidth html setDefaultStyle html setEdgeAttributes html setEdgeStyle html setGraph html setNodeAttributes html setNodeBorderColor html setNodeBorderWidth html setNodeColor html setNodeColorRule html setNodeFontColor html setNodeFontSize html setNodeHeight html setNodeLabelAlignment html setNodeLabelRule html setNodeShape html setNodeSize html setNodeSizeRule html setNodeWidth html setPosition html setZoom html sfn html showAll html showEdges html showNodes html simpleDemoGraph html vAlign html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'RCyjs' ... ** testing if installed package can be loaded * MD5 sums packaged installation of 'RCyjs' as RCyjs_2.16.0.zip * DONE (RCyjs) * installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library' package 'RCyjs' successfully unpacked and MD5 sums checked