Back to Multiple platform build/check report for BioC 3.14
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This page was generated on 2022-04-13 12:07:08 -0400 (Wed, 13 Apr 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 20.04.4 LTS)x86_644.1.3 (2022-03-10) -- "One Push-Up" 4324
tokay2Windows Server 2012 R2 Standardx644.1.3 (2022-03-10) -- "One Push-Up" 4077
machv2macOS 10.14.6 Mojavex86_644.1.3 (2022-03-10) -- "One Push-Up" 4137
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

BUILD BIN results for ProteoDisco on tokay2


To the developers/maintainers of the ProteoDisco package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/ProteoDisco.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 1475/2083HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
ProteoDisco 1.0.0  (landing page)
Job van Riet
Snapshot Date: 2022-04-12 01:55:07 -0400 (Tue, 12 Apr 2022)
git_url: https://git.bioconductor.org/packages/ProteoDisco
git_branch: RELEASE_3_14
git_last_commit: efdf16d
git_last_commit_date: 2021-10-26 13:12:13 -0400 (Tue, 26 Oct 2021)
nebbiolo2Linux (Ubuntu 20.04.4 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
tokay2Windows Server 2012 R2 Standard / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
machv2macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: ProteoDisco
Version: 1.0.0
Command: rm -rf ProteoDisco.buildbin-libdir && mkdir ProteoDisco.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=ProteoDisco.buildbin-libdir ProteoDisco_1.0.0.tar.gz
StartedAt: 2022-04-13 06:52:12 -0400 (Wed, 13 Apr 2022)
EndedAt: 2022-04-13 06:53:22 -0400 (Wed, 13 Apr 2022)
EllapsedTime: 69.8 seconds
RetCode: 0
Status:   OK  
PackageFile: ProteoDisco_1.0.0.zip
PackageFileSize: 660.8 KiB

Command output

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###
### Running command:
###
###   rm -rf ProteoDisco.buildbin-libdir && mkdir ProteoDisco.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=ProteoDisco.buildbin-libdir ProteoDisco_1.0.0.tar.gz
###
##############################################################################
##############################################################################



install for i386

* installing *source* package 'ProteoDisco' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
Creating a new generic function for 'print' in package 'ProteoDisco'
Creating a new generic function for 'summary' in package 'ProteoDisco'
** help
*** installing help indices
  converting help for package 'ProteoDisco'
    finding HTML links ... done
    ProteoDiscography                       html  
    ProteoDiscographyExample.hg19           html  
    checkProteotypicFragments               html  
    dot-checkReferenceAnchor                html  
    exportProteoDiscography                 html  
    generateJunctionModels                  html  
    generateProteoDiscography               html  
    getDiscography                          html  
    importGenomicVariants.MAF               html  
    importGenomicVariants                   html  
    importGenomicVariants.VCF               html  
    importSpliceJunctions                   html  
    importTranscriptSequences               html  
    incorporateGenomicVariants              html  
    mutantTranscripts                       html  
    organism                                html  
    print                                   html  
    seqinfo                                 html  
    seqlevels                               html  
    setGenomicSequences                     html  
    setMutantTranscripts                    html  
    setTxDb                                 html  
    show                                    html  
    summary                                 html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'ProteoDisco' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'ProteoDisco' as ProteoDisco_1.0.0.zip
* DONE (ProteoDisco)