############################################################################## ############################################################################## ### ### Running command: ### ### C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/PrecisionTrialDrawer_1.10.0.tar.gz && rm -rf PrecisionTrialDrawer.buildbin-libdir && mkdir PrecisionTrialDrawer.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=PrecisionTrialDrawer.buildbin-libdir PrecisionTrialDrawer_1.10.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL PrecisionTrialDrawer_1.10.0.zip && rm PrecisionTrialDrawer_1.10.0.tar.gz PrecisionTrialDrawer_1.10.0.zip ### ############################################################################## ############################################################################## % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 100 382k 100 382k 0 0 1011k 0 --:--:-- --:--:-- --:--:-- 1014k install for i386 * installing *source* package 'PrecisionTrialDrawer' ... ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading Creating a generic function for 'toJSON' from package 'jsonlite' in package 'googleVis' ** help *** installing help indices converting help for package 'PrecisionTrialDrawer' finding HTML links ... done CancerPanel-class html PrecisionTrialDrawer-package html appendRepo html coocMutexPlot html coveragePlot html coverageStackPlot html cpArguments html cpData html cpDataSubset html cpDesign html cpFreq html cpObj html cpObj2 html dataExtractor html filterFusions html filterMutations html getAlterations html newCancerPanel html panelDesigner html panelOptimizer html panelexample html propPowerSampleSize html saturationPlot html showCancerStudy html showTumorType html subsetAlterations html survPowerSampleSize html survPowerSampleSize1Arm html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location Creating a generic function for 'toJSON' from package 'jsonlite' in package 'googleVis' ** testing if installed package can be loaded from final location Creating a generic function for 'toJSON' from package 'jsonlite' in package 'googleVis' ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'PrecisionTrialDrawer' ... ** testing if installed package can be loaded Creating a generic function for 'toJSON' from package 'jsonlite' in package 'googleVis' * MD5 sums packaged installation of 'PrecisionTrialDrawer' as PrecisionTrialDrawer_1.10.0.zip * DONE (PrecisionTrialDrawer) * installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library' package 'PrecisionTrialDrawer' successfully unpacked and MD5 sums checked