############################################################################## ############################################################################## ### ### Running command: ### ### C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/MethylSeekR_1.34.0.tar.gz && rm -rf MethylSeekR.buildbin-libdir && mkdir MethylSeekR.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=MethylSeekR.buildbin-libdir MethylSeekR_1.34.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL MethylSeekR_1.34.0.zip && rm MethylSeekR_1.34.0.tar.gz MethylSeekR_1.34.0.zip ### ############################################################################## ############################################################################## % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 78 1073k 78 838k 0 0 1151k 0 --:--:-- --:--:-- --:--:-- 1151k 100 1073k 100 1073k 0 0 1255k 0 --:--:-- --:--:-- --:--:-- 1256k install for i386 * installing *source* package 'MethylSeekR' ... ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'MethylSeekR' finding HTML links ... done MethylSeekR-package html calculateFDRs html plotAlphaDistributionOneChr html plotFinalSegmentation html plotPMDSegmentation html readMethylome html readSNPTable html removeSNPs html savePMDSegments html saveUMRLMRSegments html segmentPMDs html segmentUMRsLMRs html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'MethylSeekR' ... ** testing if installed package can be loaded * MD5 sums packaged installation of 'MethylSeekR' as MethylSeekR_1.34.0.zip * DONE (MethylSeekR) * installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library' package 'MethylSeekR' successfully unpacked and MD5 sums checked