Mengni Liu
| Snapshot Date: 2022-04-12 01:55:07 -0400 (Tue, 12 Apr 2022) |
| git_url: https://git.bioconductor.org/packages/MesKit |
| git_branch: RELEASE_3_14 |
| git_last_commit: 0782512 |
| git_last_commit_date: 2021-10-26 13:01:22 -0400 (Tue, 26 Oct 2021) |
| Back to Multiple platform build/check report for BioC 3.14 |
|
This page was generated on 2022-04-13 12:06:51 -0400 (Wed, 13 Apr 2022).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) | x86_64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4324 |
| tokay2 | Windows Server 2012 R2 Standard | x64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4077 |
| machv2 | macOS 10.14.6 Mojave | x86_64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4137 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
|
To the developers/maintainers of the MesKit package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/MesKit.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 1087/2083 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| MesKit 1.4.0 (landing page) Mengni Liu
| nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) / x86_64 | OK | OK | WARNINGS | | ||||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | WARNINGS | OK | | ||||||||
| machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | WARNINGS | OK | | ||||||||
| Package: MesKit |
| Version: 1.4.0 |
| Command: C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/MesKit_1.4.0.tar.gz && rm -rf MesKit.buildbin-libdir && mkdir MesKit.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=MesKit.buildbin-libdir MesKit_1.4.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL MesKit_1.4.0.zip && rm MesKit_1.4.0.tar.gz MesKit_1.4.0.zip |
| StartedAt: 2022-04-12 06:03:11 -0400 (Tue, 12 Apr 2022) |
| EndedAt: 2022-04-12 06:04:45 -0400 (Tue, 12 Apr 2022) |
| EllapsedTime: 94.3 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/MesKit_1.4.0.tar.gz && rm -rf MesKit.buildbin-libdir && mkdir MesKit.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=MesKit.buildbin-libdir MesKit_1.4.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL MesKit_1.4.0.zip && rm MesKit_1.4.0.tar.gz MesKit_1.4.0.zip
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% Total % Received % Xferd Average Speed Time Time Time Current
Dload Upload Total Spent Left Speed
0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0
51 1801k 51 925k 0 0 1170k 0 0:00:01 --:--:-- 0:00:01 1171k
100 1801k 100 1801k 0 0 1451k 0 0:00:01 0:00:01 --:--:-- 1452k
install for i386
* installing *source* package 'MesKit' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
Warning: replacing previous import 'ape::degree' by 'circlize::degree' when loading 'MesKit'
** help
*** installing help indices
converting help for package 'MesKit'
finding HTML links ... done
Maf-class html
MafList-class html
calFst html
calJSI html
calNeiDist html
ccfAUC html
classifyMut html
cna2gene html
compareCCF html
compareTree html
fitSignatures html
getBinaryMatrix html
getBootstrapValue html
getBranchType html
getCCFMatrix html
getMafData html
getMafPatient html
getMafRef html
getMutBranches html
getNonSyn_vc html
getPhyloTree html
getPhyloTreePatient html
getPhyloTreeRef html
getPhyloTreeTsbLabel html
getSampleInfo html
getTree html
getTreeMethod html
mathScore html
mutCluster html
mutHeatmap html
mutTrunkBranch html
phyloTree-class html
phyloTreeList-class html
plotCNA html
plotMutProfile html
plotMutSigProfile html
plotPhyloTree html
readMaf html
readSegment html
runMesKit html
subMaf html
testNeutral html
triMatrix html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
Warning: replacing previous import 'ape::degree' by 'circlize::degree' when loading 'MesKit'
** testing if installed package can be loaded from final location
Warning: replacing previous import 'ape::degree' by 'circlize::degree' when loading 'MesKit'
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'MesKit' ...
** testing if installed package can be loaded
Warning: replacing previous import 'ape::degree' by 'circlize::degree' when loading 'MesKit'
* MD5 sums
packaged installation of 'MesKit' as MesKit_1.4.0.zip
* DONE (MesKit)
* installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library'
package 'MesKit' successfully unpacked and MD5 sums checked