############################################################################## ############################################################################## ### ### Running command: ### ### C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/IONiseR_2.18.0.tar.gz && rm -rf IONiseR.buildbin-libdir && mkdir IONiseR.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=IONiseR.buildbin-libdir IONiseR_2.18.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL IONiseR_2.18.0.zip && rm IONiseR_2.18.0.tar.gz IONiseR_2.18.0.zip ### ############################################################################## ############################################################################## % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 6 1153k 6 80787 0 0 416k 0 0:00:02 --:--:-- 0:00:02 415k 100 1153k 100 1153k 0 0 1142k 0 0:00:01 0:00:01 --:--:-- 1144k install for i386 * installing *source* package 'IONiseR' ... ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'IONiseR' finding HTML links ... done Fast5Summary-class html IONiseR html baseCalled html channelActivityPlot html channelHeatmap html eventData html fast5toFastq html fastq html fastq2D html fastqComplement html fastqTemplate html layoutPlot html muxHeatmap html plotActiveChannels html plotBaseProductionRate html plotCurrentByTime html plotEventRate html plotKmerFrequencyCorrelation html plotReadAccumulation html plotReadCategoryCounts html plotReadCategoryQuals html plotReadTypeProduction html readFast5Log html readFast5Summary html readInfo html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'IONiseR' ... ** testing if installed package can be loaded * MD5 sums packaged installation of 'IONiseR' as IONiseR_2.18.0.zip * DONE (IONiseR) * installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library' package 'IONiseR' successfully unpacked and MD5 sums checked