############################################################################## ############################################################################## ### ### Running command: ### ### C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/HumanTranscriptomeCompendium_1.10.0.tar.gz && rm -rf HumanTranscriptomeCompendium.buildbin-libdir && mkdir HumanTranscriptomeCompendium.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=HumanTranscriptomeCompendium.buildbin-libdir HumanTranscriptomeCompendium_1.10.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL HumanTranscriptomeCompendium_1.10.0.zip && rm HumanTranscriptomeCompendium_1.10.0.tar.gz HumanTranscriptomeCompendium_1.10.0.zip ### ############################################################################## ############################################################################## % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 10 2160k 10 221k 0 0 735k 0 0:00:02 --:--:-- 0:00:02 735k 90 2160k 90 1964k 0 0 1508k 0 0:00:01 0:00:01 --:--:-- 1508k 100 2160k 100 2160k 0 0 1565k 0 0:00:01 0:00:01 --:--:-- 1565k install for i386 Warning in untar2(tarfile, files, list, exdir, restore_times) : failed to copy 'HumanTranscriptomeCompendium/vignettes/htxcomp.Rmd' to 'HumanTranscriptomeCompendium/README.md' * installing *source* package 'HumanTranscriptomeCompendium' ... ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'HumanTranscriptomeCompendium' finding HTML links ... done HumanTranscriptomeCompendium.colnames html addRD html ca43k html get_ds4841 html htx_app html htx_load html htx_query_by_study_accession html htx_query_by_text html load_bigrnaFiles html load_experTable html load_studTable html path_doc4842 html procExpToGene html tx2gene_gencode27 html uniqueAcc_120518 html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path install for x64 Warning in untar2(tarfile, files, list, exdir, restore_times) : failed to copy 'HumanTranscriptomeCompendium/vignettes/htxcomp.Rmd' to 'HumanTranscriptomeCompendium/README.md' * installing *source* package 'HumanTranscriptomeCompendium' ... ** testing if installed package can be loaded * MD5 sums packaged installation of 'HumanTranscriptomeCompendium' as HumanTranscriptomeCompendium_1.10.0.zip * DONE (HumanTranscriptomeCompendium) * installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library' package 'HumanTranscriptomeCompendium' successfully unpacked and MD5 sums checked