Back to Multiple platform build/check report for BioC 3.14
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This page was generated on 2022-04-13 12:06:31 -0400 (Wed, 13 Apr 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 20.04.4 LTS)x86_644.1.3 (2022-03-10) -- "One Push-Up" 4324
tokay2Windows Server 2012 R2 Standardx644.1.3 (2022-03-10) -- "One Push-Up" 4077
machv2macOS 10.14.6 Mojavex86_644.1.3 (2022-03-10) -- "One Push-Up" 4137
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

INSTALL results for EWCE on tokay2


To the developers/maintainers of the EWCE package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/EWCE.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 610/2083HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
EWCE 1.2.0  (landing page)
Alan Murphy
Snapshot Date: 2022-04-12 01:55:07 -0400 (Tue, 12 Apr 2022)
git_url: https://git.bioconductor.org/packages/EWCE
git_branch: RELEASE_3_14
git_last_commit: 1ec3e6d
git_last_commit_date: 2021-10-26 13:08:44 -0400 (Tue, 26 Oct 2021)
nebbiolo2Linux (Ubuntu 20.04.4 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
tokay2Windows Server 2012 R2 Standard / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
machv2macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: EWCE
Version: 1.2.0
Command: C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/EWCE_1.2.0.tar.gz && rm -rf EWCE.buildbin-libdir && mkdir EWCE.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=EWCE.buildbin-libdir EWCE_1.2.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL EWCE_1.2.0.zip && rm EWCE_1.2.0.tar.gz EWCE_1.2.0.zip
StartedAt: 2022-04-12 05:28:51 -0400 (Tue, 12 Apr 2022)
EndedAt: 2022-04-12 05:31:19 -0400 (Tue, 12 Apr 2022)
EllapsedTime: 148.0 seconds
RetCode: 0
Status:   OK  

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/EWCE_1.2.0.tar.gz && rm -rf EWCE.buildbin-libdir && mkdir EWCE.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=EWCE.buildbin-libdir EWCE_1.2.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL EWCE_1.2.0.zip && rm EWCE_1.2.0.tar.gz EWCE_1.2.0.zip
###
##############################################################################
##############################################################################


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100 66352  100 66352    0     0   338k      0 --:--:-- --:--:-- --:--:--  339k

install for i386

* installing *source* package 'EWCE' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'EWCE'
    finding HTML links ... done
    add_res_to_merging_list                 html  
    bin_columns_into_quantiles              html  
    bin_specificity_into_quantiles          html  
    bootstrap_enrichment_test               html  
    check_ewce_genelist_inputs              html  
    controlled_geneset_enrichment           html  
    convert_new_ewce_to_old                 html  
    convert_old_ewce_to_new                 html  
    drop_uninformative_genes                html  
    ewce_expression_data                    html  
    ewce_plot                               html  
    filter_genes_without_1to1_homolog       html  
    fix_bad_hgnc_symbols                    html  
    fix_bad_mgi_symbols                     html  
    generate_bootstrap_plots                html  
    generate_bootstrap_plots_for_transcriptome
                                            html  
    generate_celltype_data                  html  
    generate_controlled_bootstrap_geneset   html  
    get_celltype_table                      html  
    get_summed_proportions                  html  
    merge_two_expfiles                      html  
    merged_ewce                             html  
    prep_dendro                             html  
    prepare_genesize_control_network        html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'EWCE' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'EWCE' as EWCE_1.2.0.zip
* DONE (EWCE)
* installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library'
package 'EWCE' successfully unpacked and MD5 sums checked