############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/bbs-3.14-bioc/R/bin/R CMD INSTALL BAGS ### ############################################################################## ############################################################################## * installing to library ‘/home/biocbuild/bbs-3.14-bioc/R/library’ * installing *source* package ‘BAGS’ ... ** using staged installation ** libs gcc -I"/home/biocbuild/bbs-3.14-bioc/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -Wall -c BAGS.c -o BAGS.o In file included from BAGS.c:8: FuncionesFast-Final.h: In function ‘BetaFunCSDiff2’: FuncionesFast-Final.h:145:70: warning: unused variable ‘YMu1’ [-Wunused-variable] 145 | double media1,media,varianza1,varianza,resultado,varaux0,varaux1,YMu1; | ^~~~ FuncionesFast-Final.h: In function ‘AlfaFunCS’: FuncionesFast-Final.h:166:105: warning: unused variable ‘MediaDiff’ [-Wunused-variable] 166 | double CSiDiff,CNoDiff,Cest,Mu,aux1,aux4,suma,zuma,cons,rznLog,rzn,prob,alea,resultado,C,A,varianza,MediaDiff; | ^~~~~~~~~ FuncionesFast-Final.h:166:94: warning: unused variable ‘A’ [-Wunused-variable] 166 | double CSiDiff,CNoDiff,Cest,Mu,aux1,aux4,suma,zuma,cons,rznLog,rzn,prob,alea,resultado,C,A,varianza,MediaDiff; | ^ FuncionesFast-Final.h:166:92: warning: unused variable ‘C’ [-Wunused-variable] 166 | double CSiDiff,CNoDiff,Cest,Mu,aux1,aux4,suma,zuma,cons,rznLog,rzn,prob,alea,resultado,C,A,varianza,MediaDiff; | ^ BAGS.c: In function ‘Gibbs5’: BAGS.c:25:48: warning: unused variable ‘resI’ [-Wunused-variable] 25 | double escala1,escala2,escala3,escala,rate,resI; | ^~~~ BAGS.c:25:43: warning: unused variable ‘rate’ [-Wunused-variable] 25 | double escala1,escala2,escala3,escala,rate,resI; | ^~~~ BAGS.c:25:36: warning: unused variable ‘escala’ [-Wunused-variable] 25 | double escala1,escala2,escala3,escala,rate,resI; | ^~~~~~ BAGS.c:25:28: warning: unused variable ‘escala3’ [-Wunused-variable] 25 | double escala1,escala2,escala3,escala,rate,resI; | ^~~~~~~ BAGS.c:25:20: warning: unused variable ‘escala2’ [-Wunused-variable] 25 | double escala1,escala2,escala3,escala,rate,resI; | ^~~~~~~ BAGS.c:25:12: warning: unused variable ‘escala1’ [-Wunused-variable] 25 | double escala1,escala2,escala3,escala,rate,resI; | ^~~~~~~ BAGS.c:24:12: warning: unused variable ‘formaAux’ [-Wunused-variable] 24 | double formaAux; | ^~~~~~~~ BAGS.c:18:80: warning: variable ‘ResSgmA’ set but not used [-Wunused-but-set-variable] 18 | double ResRho1,ResRho2,ResRho3,ResRho4,ResSgmA1,ResSgmA2,ResSgmA3,ResSgmA4,ResSgmA; | ^~~~~~~ BAGS.c:15:15: warning: variable ‘AaPi’ set but not used [-Wunused-but-set-variable] 15 | double Mm,AaPi,Ade,Ss,Rr,c0,prob,alea,forma1,forma2,shape1,shape2; | ^~~~ BAGS.c: In function ‘Gibbs4’: BAGS.c:342:48: warning: unused variable ‘resI’ [-Wunused-variable] 342 | double escala1,escala2,escala3,escala,rate,resI; // Aqui tengo duda | ^~~~ BAGS.c:342:43: warning: unused variable ‘rate’ [-Wunused-variable] 342 | double escala1,escala2,escala3,escala,rate,resI; // Aqui tengo duda | ^~~~ BAGS.c:342:36: warning: unused variable ‘escala’ [-Wunused-variable] 342 | double escala1,escala2,escala3,escala,rate,resI; // Aqui tengo duda | ^~~~~~ BAGS.c:342:28: warning: unused variable ‘escala3’ [-Wunused-variable] 342 | double escala1,escala2,escala3,escala,rate,resI; // Aqui tengo duda | ^~~~~~~ BAGS.c:342:20: warning: unused variable ‘escala2’ [-Wunused-variable] 342 | double escala1,escala2,escala3,escala,rate,resI; // Aqui tengo duda | ^~~~~~~ BAGS.c:342:12: warning: unused variable ‘escala1’ [-Wunused-variable] 342 | double escala1,escala2,escala3,escala,rate,resI; // Aqui tengo duda | ^~~~~~~ BAGS.c:341:12: warning: unused variable ‘formaAux’ [-Wunused-variable] 341 | double formaAux; | ^~~~~~~~ BAGS.c:335:63: warning: variable ‘ResSgmA’ set but not used [-Wunused-but-set-variable] 335 | double ResRho1,ResRho2,ResRho3,ResSgmA1,ResSgmA2,ResSgmA3,ResSgmA; | ^~~~~~~ BAGS.c:332:15: warning: variable ‘AaPi’ set but not used [-Wunused-but-set-variable] 332 | double Mm,AaPi,Ade,Ss,Rr,c0,prob,alea,forma1,forma2,shape1,shape2; | ^~~~ BAGS.c: In function ‘Gibbs3’: BAGS.c:593:48: warning: unused variable ‘resI’ [-Wunused-variable] 593 | double escala1,escala2,escala3,escala,rate,resI; // Aqui tengo duda | ^~~~ BAGS.c:593:43: warning: unused variable ‘rate’ [-Wunused-variable] 593 | double escala1,escala2,escala3,escala,rate,resI; // Aqui tengo duda | ^~~~ BAGS.c:593:36: warning: unused variable ‘escala’ [-Wunused-variable] 593 | double escala1,escala2,escala3,escala,rate,resI; // Aqui tengo duda | ^~~~~~ BAGS.c:593:28: warning: unused variable ‘escala3’ [-Wunused-variable] 593 | double escala1,escala2,escala3,escala,rate,resI; // Aqui tengo duda | ^~~~~~~ BAGS.c:593:20: warning: unused variable ‘escala2’ [-Wunused-variable] 593 | double escala1,escala2,escala3,escala,rate,resI; // Aqui tengo duda | ^~~~~~~ BAGS.c:593:12: warning: unused variable ‘escala1’ [-Wunused-variable] 593 | double escala1,escala2,escala3,escala,rate,resI; // Aqui tengo duda | ^~~~~~~ BAGS.c:592:12: warning: unused variable ‘formaAux’ [-Wunused-variable] 592 | double formaAux; | ^~~~~~~~ BAGS.c:586:46: warning: variable ‘ResSgmA’ set but not used [-Wunused-but-set-variable] 586 | double ResRho1,ResRho2,ResSgmA1,ResSgmA2,ResSgmA; | ^~~~~~~ BAGS.c:583:15: warning: variable ‘AaPi’ set but not used [-Wunused-but-set-variable] 583 | double Mm,AaPi,Ade,Ss,Rr,c0,prob,alea,forma1,forma2,shape1,shape2; | ^~~~ BAGS.c: In function ‘Gibbs2’: BAGS.c:786:48: warning: unused variable ‘resI’ [-Wunused-variable] 786 | double escala1,escala2,escala3,escala,rate,resI; // Aqui tengo duda | ^~~~ BAGS.c:786:43: warning: unused variable ‘rate’ [-Wunused-variable] 786 | double escala1,escala2,escala3,escala,rate,resI; // Aqui tengo duda | ^~~~ BAGS.c:786:36: warning: unused variable ‘escala’ [-Wunused-variable] 786 | double escala1,escala2,escala3,escala,rate,resI; // Aqui tengo duda | ^~~~~~ BAGS.c:786:28: warning: unused variable ‘escala3’ [-Wunused-variable] 786 | double escala1,escala2,escala3,escala,rate,resI; // Aqui tengo duda | ^~~~~~~ BAGS.c:786:20: warning: unused variable ‘escala2’ [-Wunused-variable] 786 | double escala1,escala2,escala3,escala,rate,resI; // Aqui tengo duda | ^~~~~~~ BAGS.c:786:12: warning: unused variable ‘escala1’ [-Wunused-variable] 786 | double escala1,escala2,escala3,escala,rate,resI; // Aqui tengo duda | ^~~~~~~ BAGS.c:785:12: warning: unused variable ‘formaAux’ [-Wunused-variable] 785 | double formaAux; | ^~~~~~~~ BAGS.c:779:29: warning: variable ‘ResSgmA’ set but not used [-Wunused-but-set-variable] 779 | double ResRho1,ResSgmA1,ResSgmA; | ^~~~~~~ BAGS.c:776:15: warning: variable ‘AaPi’ set but not used [-Wunused-but-set-variable] 776 | double Mm,AaPi,Ade,Ss,Rr,c0,prob,alea,forma1,forma2,shape1,shape2; | ^~~~ gcc -shared -L/home/biocbuild/bbs-3.14-bioc/R/lib -L/usr/local/lib -o BAGS.so BAGS.o -L/home/biocbuild/bbs-3.14-bioc/R/lib -lR installing to /home/biocbuild/bbs-3.14-bioc/R/library/00LOCK-BAGS/00new/BAGS/libs ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (BAGS)