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This page was generated on 2021-10-16 15:58:41 -0400 (Sat, 16 Oct 2021).

INSTALL results for JctSeqData on malbec2

To the developers/maintainers of the JctSeqData package:
Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 197/406HostnameOS / ArchINSTALLBUILDCHECK
JctSeqData 1.22.0  (landing page)
Stephen Hartley
Snapshot Date: 2021-10-16 09:30:07 -0400 (Sat, 16 Oct 2021)
git_url: https://git.bioconductor.org/packages/JctSeqData
git_branch: RELEASE_3_13
git_last_commit: 3ab0ec2
git_last_commit_date: 2021-05-19 11:54:08 -0400 (Wed, 19 May 2021)
malbec2Linux (Ubuntu 20.04.2 LTS) / x86_64  OK    OK    ERROR  

Summary

Package: JctSeqData
Version: 1.22.0
Command: /home/biocbuild/bbs-3.13-bioc/R/bin/R CMD INSTALL JctSeqData
StartedAt: 2021-10-16 11:03:31 -0400 (Sat, 16 Oct 2021)
EndedAt: 2021-10-16 11:03:52 -0400 (Sat, 16 Oct 2021)
EllapsedTime: 20.9 seconds
RetCode: 0
Status:   OK  

Command output

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### Running command:
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###   /home/biocbuild/bbs-3.13-bioc/R/bin/R CMD INSTALL JctSeqData
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* installing to library ‘/home/biocbuild/bbs-3.13-bioc/R/library’
* installing *source* package ‘JctSeqData’ ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
Warning: namespace ‘JunctionSeq’ is not available and has been replaced
by .GlobalEnv when processing object ‘jscs’
Warning: namespace ‘JunctionSeq’ is not available and has been replaced
by .GlobalEnv when processing object ‘jscs’
Warning: namespace ‘JunctionSeq’ is not available and has been replaced
by .GlobalEnv when processing object ‘jscs2’
Warning: namespace ‘JunctionSeq’ is not available and has been replaced
by .GlobalEnv when processing object ‘jscs2’
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
Warning: Package 'JctSeqData' is deprecated and will be removed from
  Bioconductor version 3.14
** testing if installed package can be loaded from final location
Warning: Package 'JctSeqData' is deprecated and will be removed from
  Bioconductor version 3.14
** testing if installed package keeps a record of temporary installation path
* DONE (JctSeqData)