############################################################################## ############################################################################## ### ### Running command: ### ### C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/deltaCaptureC_1.6.0.tar.gz && rm -rf deltaCaptureC.buildbin-libdir && mkdir deltaCaptureC.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=deltaCaptureC.buildbin-libdir deltaCaptureC_1.6.0.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL deltaCaptureC_1.6.0.zip && rm deltaCaptureC_1.6.0.tar.gz deltaCaptureC_1.6.0.zip ### ############################################################################## ############################################################################## % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 100 370k 100 370k 0 0 1217k 0 --:--:-- --:--:-- --:--:-- 1221k install for i386 * installing *source* package 'deltaCaptureC' ... ** using staged installation ** R ** data *** moving datasets to lazyload DB ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'deltaCaptureC' finding HTML links ... done bigBinSize html binSummarizedExperiment html binnedDeltaPlot html binnedDeltaSE html binnedSummarizedExperiment html deltaSE html dot-getRunsAndTotals html downshiftDFtoMatrix html generatePermutation html getDeltaSE html getLopsidedness html getMeanNormalizedCountsSE html getNormalizedCountsSE html getOverlapWeights html getPValueCutoff html getRunAndLopsidednessStatistics html getRunStatistics html getRunStatisticsDist html getRunTotals html getSignificantRegions html getSizeFactorsDF html getSizeFactorsSE html miniDeltaSE html miniSE html miniSEDF html numPermutations html pValue html plotSignificantRegions html plotTitle html rebinToMultiple html regionOfInterest html significanceType html significantRegions html significantRegionsPlot html smallBinSize html smallBins html smallSetOfSmallBins html smallerDeltaSE html viewpointRegion html weightsExampleBins html weightsExampleGr html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'deltaCaptureC' ... ** testing if installed package can be loaded * MD5 sums packaged installation of 'deltaCaptureC' as deltaCaptureC_1.6.0.zip * DONE (deltaCaptureC) * installing to library 'C:/Users/biocbuild/bbs-3.13-bioc/R/library' package 'deltaCaptureC' successfully unpacked and MD5 sums checked