############################################################################## ############################################################################## ### ### Running command: ### ### C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/GDCRNATools_1.13.1.tar.gz && rm -rf GDCRNATools.buildbin-libdir && mkdir GDCRNATools.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=GDCRNATools.buildbin-libdir GDCRNATools_1.13.1.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL GDCRNATools_1.13.1.zip && rm GDCRNATools_1.13.1.tar.gz GDCRNATools_1.13.1.zip ### ############################################################################## ############################################################################## % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 20 3963k 20 814k 0 0 1535k 0 0:00:02 --:--:-- 0:00:02 1534k 94 3963k 94 3760k 0 0 2480k 0 0:00:01 0:00:01 --:--:-- 2480k 100 3963k 100 3963k 0 0 2538k 0 0:00:01 0:00:01 --:--:-- 2539k install for i386 * installing *source* package 'GDCRNATools' ... ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'GDCRNATools' finding HTML links ... done DEGAll html GDCRNATools-package html enrichOutput html gdcBarPlot html gdcCEAnalysis html gdcClinicalDownload html gdcClinicalMerge html gdcCorPlot html gdcDEAnalysis html gdcDEReport html gdcEnrichAnalysis html gdcEnrichPlot html gdcExportNetwork html gdcFilterDuplicate html gdcFilterSampleType html gdcHeatmap html gdcKMPlot html gdcMatchSamples html gdcParseMetadata html gdcRNADownload html gdcRNAMerge html gdcSurvivalAnalysis html gdcVolcanoPlot html gdcVoomNormalization html lncTarget html mirCounts html pcTarget html rnaCounts html shinyCorPlot html shinyKMPlot html shinyPathview html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'GDCRNATools' ... ** testing if installed package can be loaded * MD5 sums packaged installation of 'GDCRNATools' as GDCRNATools_1.13.1.zip * DONE (GDCRNATools) * installing to library 'C:/Users/biocbuild/bbs-3.13-bioc/R/library' package 'GDCRNATools' successfully unpacked and MD5 sums checked