############################################################################## ############################################################################## ### ### Running command: ### ### C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/CexoR_1.30.1.tar.gz && rm -rf CexoR.buildbin-libdir && mkdir CexoR.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=CexoR.buildbin-libdir CexoR_1.30.1.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL CexoR_1.30.1.zip && rm CexoR_1.30.1.tar.gz CexoR_1.30.1.zip ### ############################################################################## ############################################################################## % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 100 1521k 100 1521k 0 0 2688k 0 --:--:-- --:--:-- --:--:-- 2693k install for i386 * installing *source* package 'CexoR' ... ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading Warning: replacing previous import 'Biostrings::pattern' by 'grid::pattern' when loading 'genomation' ** help *** installing help indices converting help for package 'CexoR' finding HTML links ... done CexoR-internal html CexoR-package html cexor html REDIRECT:topic Previous alias or file overwritten by alias: C:/Users/biocbuild/bbs-3.13-bioc/meat/CexoR.buildbin-libdir/00LOCK-CexoR/00new/CexoR/help/cexor.html plotcexor html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location Warning: replacing previous import 'Biostrings::pattern' by 'grid::pattern' when loading 'genomation' Warning: Package 'CexoR' is deprecated and will be removed from Bioconductor version 3.14 ** testing if installed package can be loaded from final location Warning: replacing previous import 'Biostrings::pattern' by 'grid::pattern' when loading 'genomation' Warning: Package 'CexoR' is deprecated and will be removed from Bioconductor version 3.14 ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'CexoR' ... ** testing if installed package can be loaded Warning: replacing previous import 'Biostrings::pattern' by 'grid::pattern' when loading 'genomation' Warning: Package 'CexoR' is deprecated and will be removed from Bioconductor version 3.14 * MD5 sums packaged installation of 'CexoR' as CexoR_1.30.1.zip * DONE (CexoR) * installing to library 'C:/Users/biocbuild/bbs-3.13-bioc/R/library' package 'CexoR' successfully unpacked and MD5 sums checked