############################################################################## ############################################################################## ### ### Running command: ### ### C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/CAMERA_1.48.0.tar.gz && rm -rf CAMERA.buildbin-libdir && mkdir CAMERA.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=CAMERA.buildbin-libdir CAMERA_1.48.0.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL CAMERA_1.48.0.zip && rm CAMERA_1.48.0.tar.gz CAMERA_1.48.0.zip ### ############################################################################## ############################################################################## % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 85 1800k 85 1530k 0 0 1529k 0 0:00:01 0:00:01 --:--:-- 1530k 100 1800k 100 1800k 0 0 1614k 0 0:00:01 0:00:01 --:--:-- 1616k install for i386 * installing *source* package 'CAMERA' ... ** using staged installation ** libs "C:/rtools40/mingw32/bin/"gcc -I"C:/Users/BIOCBU~1/BBS-3~1.13-/R/include" -DNDEBUG -I"c:/extsoft/include" -O2 -Wall -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -c fastMatch.c -o fastMatch.o C:/rtools40/mingw32/bin/gcc -shared -s -static-libgcc -o CAMERA.dll tmp.def fastMatch.o -Lc:/extsoft/lib/i386 -Lc:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.13-/R/bin/i386 -lR installing to C:/Users/biocbuild/bbs-3.13-bioc/meat/CAMERA.buildbin-libdir/00LOCK-CAMERA/00new/CAMERA/libs/i386 ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'CAMERA' finding HTML links ... done annotate-methods html annotateDiffreport html finding level-2 HTML links ... done calcCaS-methods html calcCiS-methods html calcIsotopes-methods html calcPC-methods html calcPC.hcs-methods html calcPC.lpc-methods html cleanParallel html combinexsAnnos html compoundLibraries html compoundQuantiles-class html compoundQuantiles html findAdducts-methods html findIsotopes-methods html findIsotopesWithValidation-methods html findKendrickMasses html findNeutralLoss html findNeutralLossSpecs html getAllPeakEICs-methods html getAtomCount-compoundQuantiles-method html getIsotopeCluster html getIsotopeProportion-compoundQuantiles-method html getPeaklist-methods html getReducedPeaklist-methods html getpspectra html groupCorr-methods html groupDen-methods html groupFWHM-methods html massWindowSizes html mm14 html plotEIC.xsAnnotate html plotPsSpectrum.xsAnnotate html psDist-methods html pspec2metfrag html ruleSet-class html xsAnnotate-class html xsAnnotate html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'CAMERA' ... ** libs "C:/rtools40/mingw64/bin/"gcc -I"C:/Users/BIOCBU~1/BBS-3~1.13-/R/include" -DNDEBUG -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -c fastMatch.c -o fastMatch.o C:/rtools40/mingw64/bin/gcc -shared -s -static-libgcc -o CAMERA.dll tmp.def fastMatch.o -LC:/extsoft/lib/x64 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.13-/R/bin/x64 -lR installing to C:/Users/biocbuild/bbs-3.13-bioc/meat/CAMERA.buildbin-libdir/CAMERA/libs/x64 ** testing if installed package can be loaded * MD5 sums packaged installation of 'CAMERA' as CAMERA_1.48.0.zip * DONE (CAMERA) * installing to library 'C:/Users/biocbuild/bbs-3.13-bioc/R/library' package 'CAMERA' successfully unpacked and MD5 sums checked