| Back to Multiple platform build/check report for BioC 3.13 |
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This page was generated on 2021-10-15 15:05:57 -0400 (Fri, 15 Oct 2021).
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To the developers/maintainers of the ArrayTools package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/ArrayTools.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 86/2041 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
Arthur Li
| nebbiolo1 | Linux (Ubuntu 20.04.2 LTS) / x86_64 | OK | ERROR | skipped | |||||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | OK | ERROR | skipped | skipped | |||||||||
| machv2 | macOS 10.14.6 Mojave / x86_64 | OK | ERROR | skipped | skipped | |||||||||
| Package: ArrayTools |
| Version: 1.52.0 |
| Command: C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/ArrayTools_1.52.0.tar.gz && rm -rf ArrayTools.buildbin-libdir && mkdir ArrayTools.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=ArrayTools.buildbin-libdir ArrayTools_1.52.0.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL ArrayTools_1.52.0.zip && rm ArrayTools_1.52.0.tar.gz ArrayTools_1.52.0.zip |
| StartedAt: 2021-10-14 07:53:24 -0400 (Thu, 14 Oct 2021) |
| EndedAt: 2021-10-14 07:54:17 -0400 (Thu, 14 Oct 2021) |
| EllapsedTime: 52.3 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/ArrayTools_1.52.0.tar.gz && rm -rf ArrayTools.buildbin-libdir && mkdir ArrayTools.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=ArrayTools.buildbin-libdir ArrayTools_1.52.0.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL ArrayTools_1.52.0.zip && rm ArrayTools_1.52.0.tar.gz ArrayTools_1.52.0.zip
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install for i386
* installing *source* package 'ArrayTools' ...
** using staged installation
** R
** data
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'ArrayTools'
finding HTML links ... done
Output2HTML html
QC html
Sort html
adjustment html
contrastMatrix-class html
createExpressionSet html
createGSEAFiles html
createIndex html
createIngenuityFile html
designMatrix-class html
eSetExample html
exprsExample html
geneFilter html
getAdjP html
getAnnotation html
getCompare1 html
getCompare2 html
getContrast html
getCovariates html
getDesign html
getF html
getFC html
getFCCutoff html
getFilterMethod html
getID html
getIndex html
getIntIndex html
getInteraction html
getLength html
getLevel html
getNormalizationMethod html
getP html
getPCutoff html
getTarget html
hugene10stCONTROL html
interactionResult-class html
mogene10stCONTROL html
output.cls html
output.gct html
output.ing html
pDataExample html
postInteraction html
preProcess3prime html
preProcessGeneST html
qa3prime html
qaGeneST html
regress html
regressResult-class html
regressionMethod html
selectSigGene html
selectSigGeneInt html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
Warning: Package 'ArrayTools' is deprecated and will be removed from
Bioconductor version 3.14
** testing if installed package can be loaded from final location
Warning: Package 'ArrayTools' is deprecated and will be removed from
Bioconductor version 3.14
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'ArrayTools' ...
** testing if installed package can be loaded
Warning: Package 'ArrayTools' is deprecated and will be removed from
Bioconductor version 3.14
* MD5 sums
packaged installation of 'ArrayTools' as ArrayTools_1.52.0.zip
* DONE (ArrayTools)
* installing to library 'C:/Users/biocbuild/bbs-3.13-bioc/R/library'
package 'ArrayTools' successfully unpacked and MD5 sums checked