############################################################################## ############################################################################## ### ### Running command: ### ### C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/AnnotationForge_1.34.1.tar.gz && rm -rf AnnotationForge.buildbin-libdir && mkdir AnnotationForge.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=AnnotationForge.buildbin-libdir AnnotationForge_1.34.1.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL AnnotationForge_1.34.1.zip && rm AnnotationForge_1.34.1.tar.gz AnnotationForge_1.34.1.zip ### ############################################################################## ############################################################################## % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 8 3285k 8 291k 0 0 698k 0 0:00:04 --:--:-- 0:00:04 698k 52 3285k 52 1736k 0 0 1227k 0 0:00:02 0:00:01 0:00:01 1227k 100 3285k 100 3285k 0 0 1597k 0 0:00:02 0:00:02 --:--:-- 1598k install for i386 * installing *source* package 'AnnotationForge' ... ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'AnnotationForge' finding HTML links ... done AnnDbPkg-maker html finding level-2 HTML links ... done available.db0pkgs html generateSeqnames_db html getProbeDataAffy html getProbeData_1lq html makeChipPackageFromDataFrames html makeInpDb html makeOrgPackage html makeOrgPackageFromNCBI html makeProbePackage html sqlForge-makeCHIPDB html sqlForge-popDB html sqlForge-wrapDBPackages html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'AnnotationForge' ... ** testing if installed package can be loaded * MD5 sums packaged installation of 'AnnotationForge' as AnnotationForge_1.34.1.zip * DONE (AnnotationForge) * installing to library 'C:/Users/biocbuild/bbs-3.13-bioc/R/library' package 'AnnotationForge' successfully unpacked and MD5 sums checked