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INSTALL report for animalcules on riesling1

This page was generated on 2020-10-28 13:27:38 -0400 (Wed, 28 Oct 2020).

TO THE DEVELOPERS/MAINTAINERS OF THE animalcules PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page.
Package 58/1974HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
animalcules 1.6.0
Yue Zhao
Snapshot Date: 2020-10-27 13:12:07 -0400 (Tue, 27 Oct 2020)
URL: https://git.bioconductor.org/packages/animalcules
Branch: RELEASE_3_12
Last Commit: 6a2f3dd
Last Changed Date: 2020-10-27 11:45:58 -0400 (Tue, 27 Oct 2020)
malbec1 Linux (Ubuntu 18.04.4 LTS) / x86_64  OK  OK  OK YES, new version is higher than in internal repository
nebbiolo1 Linux (Ubuntu 20.04.1 LTS) / x86_64  OK  OK  OK 
tokay1 Windows Server 2012 R2 Standard / x64  OK  OK  OK  OK YES, new version is higher than in internal repository
riesling1 Windows Server 2019 Standard / x64 [ OK ] OK  OK  OK 
merida1 macOS 10.14.6 Mojave / x86_64  OK  OK  OK  OK YES, new version is higher than in internal repository

Summary

Package: animalcules
Version: 1.6.0
Command: C:\cygwin\bin\curl.exe -O http://172.29.0.3/BBS/3.12/bioc/src/contrib/animalcules_1.6.0.tar.gz && rm -rf animalcules.buildbin-libdir && mkdir animalcules.buildbin-libdir && D:\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=animalcules.buildbin-libdir animalcules_1.6.0.tar.gz && D:\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL animalcules_1.6.0.zip && rm animalcules_1.6.0.tar.gz animalcules_1.6.0.zip
StartedAt: 2020-10-27 17:29:57 -0400 (Tue, 27 Oct 2020)
EndedAt: 2020-10-27 17:30:36 -0400 (Tue, 27 Oct 2020)
EllapsedTime: 38.8 seconds
RetCode: 0
Status:  OK  

Command output

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O http://172.29.0.3/BBS/3.12/bioc/src/contrib/animalcules_1.6.0.tar.gz && rm -rf animalcules.buildbin-libdir && mkdir animalcules.buildbin-libdir && D:\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=animalcules.buildbin-libdir animalcules_1.6.0.tar.gz && D:\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL animalcules_1.6.0.zip && rm animalcules_1.6.0.tar.gz animalcules_1.6.0.zip
###
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  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
 13 1844k   13  247k    0     0   820k      0  0:00:02 --:--:--  0:00:02  820k
100 1844k  100 1844k    0     0  2736k      0 --:--:-- --:--:-- --:--:-- 2732k

install for i386

* installing *source* package 'animalcules' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'animalcules'
    finding HTML links ... done
    alpha_div_boxplot                       html  
    alpha_div_test                          html  
    animalcules-package                     html  
    counts_to_logcpm                        html  
    counts_to_relabu                        html  
    df_char_to_factor                       html  
    differential_abundance                  html  
    dimred_pca                              html  
    dimred_pcoa                             html  
    dimred_tsne                             html  
    dimred_umap                             html  
    diversities                             html  
    diversities_help                        html  
    diversity_beta_boxplot                  html  
    diversity_beta_heatmap                  html  
    diversity_beta_test                     html  
    do_alpha_div_test                       html  
    filter_categorize                       html  
    filter_summary_bar_density              html  
    filter_summary_pie_box                  html  
    find_biomarker                          html  
    find_taxon_mat                          html  
    find_taxonomy                           html  
    find_taxonomy_300                       html  
    gini_simpson                            html  
    grep_tid                                html  
    inverse_simpson                         html  
    is_categorical                          html  
    is_integer0                             html  
    is_integer1                             html  
    mae_pick_organisms                      html  
    mae_pick_samples                        html  
    pct2str                                 html  
    percent                                 html  
    read_pathoscope_data                    html  
    relabu_barplot                          html  
    relabu_boxplot                          html  
    relabu_heatmap                          html  
    run_animalcules                         html  
    shannon                                 html  
    simpson_index                           html  
    upsample_counts                         html  
    write_to_biom                           html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'animalcules' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'animalcules' as animalcules_1.6.0.zip
* DONE (animalcules)
* installing to library 'D:/biocbuild/bbs-3.12-bioc/R/library'
package 'animalcules' successfully unpacked and MD5 sums checked