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INSTALL report for Chicago on tokay1

This page was generated on 2021-05-06 12:30:12 -0400 (Thu, 06 May 2021).

To the developers/maintainers of the Chicago package:
Please make sure to use the following settings in order to reproduce any error or warning you see on this page.
Package 279/1974HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
Chicago 1.18.0  (landing page)
Mikhail Spivakov
Snapshot Date: 2021-05-05 14:51:38 -0400 (Wed, 05 May 2021)
URL: https://git.bioconductor.org/packages/Chicago
Branch: RELEASE_3_12
Last Commit: 36b6668
Last Changed Date: 2020-10-27 11:09:38 -0400 (Tue, 27 Oct 2020)
malbec1Linux (Ubuntu 18.04.5 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version exists in internal repository
tokay1Windows Server 2012 R2 Standard / x64  OK    OK    OK    OK  UNNEEDED, same version exists in internal repository
merida1macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version exists in internal repository

Summary

Package: Chicago
Version: 1.18.0
Command: C:\cygwin\bin\curl.exe -O http://172.29.0.3/BBS/3.12/bioc/src/contrib/Chicago_1.18.0.tar.gz && rm -rf Chicago.buildbin-libdir && mkdir Chicago.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=Chicago.buildbin-libdir Chicago_1.18.0.tar.gz && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL Chicago_1.18.0.zip && rm Chicago_1.18.0.tar.gz Chicago_1.18.0.zip
StartedAt: 2021-05-05 17:34:33 -0400 (Wed, 05 May 2021)
EndedAt: 2021-05-05 17:36:46 -0400 (Wed, 05 May 2021)
EllapsedTime: 133.0 seconds
RetCode: 0
Status:   OK   

Command output

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O http://172.29.0.3/BBS/3.12/bioc/src/contrib/Chicago_1.18.0.tar.gz && rm -rf Chicago.buildbin-libdir && mkdir Chicago.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=Chicago.buildbin-libdir Chicago_1.18.0.tar.gz && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL Chicago_1.18.0.zip && rm Chicago_1.18.0.tar.gz Chicago_1.18.0.zip
###
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  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
100  430k  100  430k    0     0  13.5M      0 --:--:-- --:--:-- --:--:-- 14.0M

install for i386

* installing *source* package 'Chicago' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'Chicago'
    finding HTML links ... done
    Chicago-package                         html  
    cdUnitTest                              html  
    chicagoData                             html  
    chicagoPipeline                         html  
    copyCD                                  html  
    defaultSettings                         html  
    estimateBrownianComponent               html  
    estimateDistFun                         html  
    estimateTechnicalNoise                  html  
    exportResults                           html  
    getPvals                                html  
    getScores                               html  
    getSkOnly                               html  
    mergeSamples                            html  
    modifySettings                          html  
    normaliseBaits                          html  
    normaliseOtherEnds                      html  
    overlapFragWithFeatures                 html  
    finding level-2 HTML links ... done

    peakEnrichment4Features                 html  
    plotBaits                               html  
    plotDistFun                             html  
    readAndMerge                            html  
    readSample                              html  
    setExperiment                           html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'Chicago' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'Chicago' as Chicago_1.18.0.zip
* DONE (Chicago)
* installing to library 'C:/Users/biocbuild/bbs-3.12-bioc/R/library'
package 'Chicago' successfully unpacked and MD5 sums checked