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INSTALL report for CAFE on tokay1

This page was generated on 2021-05-06 12:30:06 -0400 (Thu, 06 May 2021).

To the developers/maintainers of the CAFE package:
Please make sure to use the following settings in order to reproduce any error or warning you see on this page.
Package 222/1974HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
CAFE 1.26.0  (landing page)
Sander Bollen
Snapshot Date: 2021-05-05 14:51:38 -0400 (Wed, 05 May 2021)
URL: https://git.bioconductor.org/packages/CAFE
Branch: RELEASE_3_12
Last Commit: 2dd3923
Last Changed Date: 2020-10-27 10:55:14 -0400 (Tue, 27 Oct 2020)
malbec1Linux (Ubuntu 18.04.5 LTS) / x86_64  OK    OK    WARNINGS  UNNEEDED, same version exists in internal repository
tokay1Windows Server 2012 R2 Standard / x64  OK    OK    WARNINGS    OK  UNNEEDED, same version exists in internal repository
merida1macOS 10.14.6 Mojave / x86_64  OK    OK    WARNINGS    OK  UNNEEDED, same version exists in internal repository

Summary

Package: CAFE
Version: 1.26.0
Command: C:\cygwin\bin\curl.exe -O http://172.29.0.3/BBS/3.12/bioc/src/contrib/CAFE_1.26.0.tar.gz && rm -rf CAFE.buildbin-libdir && mkdir CAFE.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=CAFE.buildbin-libdir CAFE_1.26.0.tar.gz && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL CAFE_1.26.0.zip && rm CAFE_1.26.0.tar.gz CAFE_1.26.0.zip
StartedAt: 2021-05-05 18:37:41 -0400 (Wed, 05 May 2021)
EndedAt: 2021-05-05 18:39:08 -0400 (Wed, 05 May 2021)
EllapsedTime: 87.5 seconds
RetCode: 0
Status:   OK   

Command output

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O http://172.29.0.3/BBS/3.12/bioc/src/contrib/CAFE_1.26.0.tar.gz && rm -rf CAFE.buildbin-libdir && mkdir CAFE.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=CAFE.buildbin-libdir CAFE_1.26.0.tar.gz && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL CAFE_1.26.0.zip && rm CAFE_1.26.0.tar.gz CAFE_1.26.0.zip
###
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  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
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  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
  0 2278k    0  8515    0     0   396k      0  0:00:05 --:--:--  0:00:05  395k
100 2278k  100 2278k    0     0  32.6M      0 --:--:-- --:--:-- --:--:-- 32.7M

install for i386

* installing *source* package 'CAFE' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'CAFE'
    finding HTML links ... done
    CAFE-package                            html  
    CAFE                                    html  
    ProcessCels                             html  
    armStats                                html  
    bandStats                               html  
    chromosomeStats                         html  
    cliSubset                               html  
    discontPlot                             html  
    discontSmooth                           html  
    facetPlot                               html  
    fisher.method                           html  
    guiSubset                               html  
    rawPlot                                 html  
    slidPlot                                html  
    slidSmooth                              html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'CAFE' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'CAFE' as CAFE_1.26.0.zip
* DONE (CAFE)
* installing to library 'C:/Users/biocbuild/bbs-3.12-bioc/R/library'
package 'CAFE' successfully unpacked and MD5 sums checked