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BUILD report for BioSeqClass on nebbiolo1

This page was generated on 2020-09-27 10:14:02 -0400 (Sun, 27 Sep 2020).

TO THE DEVELOPERS/MAINTAINERS OF THE BioSeqClass PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page.
Package 177/1923HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
BioSeqClass 1.47.1
Li Hong
Snapshot Date: 2020-09-26 14:42:06 -0400 (Sat, 26 Sep 2020)
URL: https://git.bioconductor.org/packages/BioSeqClass
Branch: master
Last Commit: dcf5f74
Last Changed Date: 2020-06-08 10:03:34 -0400 (Mon, 08 Jun 2020)
malbec1 Linux (Ubuntu 18.04.4 LTS) / x86_64  OK  ERROR  skipped 
nebbiolo1 Linux (Ubuntu 20.04.1 LTS) / x86_64  OK [ ERROR ] skipped 
tokay1 Windows Server 2012 R2 Standard / x64  OK  ERROR  skipped  skipped 
riesling1 Windows Server 2019 Standard / x64  OK  ERROR  skipped  skipped 
merida1 macOS 10.14.6 Mojave / x86_64  OK  ERROR  skipped  skipped 

Summary

Package: BioSeqClass
Version: 1.47.1
Command: /home/biocbuild/bbs-3.12-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data BioSeqClass
StartedAt: 2020-09-26 17:44:14 -0400 (Sat, 26 Sep 2020)
EndedAt: 2020-09-26 17:45:26 -0400 (Sat, 26 Sep 2020)
EllapsedTime: 72.0 seconds
RetCode: 1
Status:  ERROR 
PackageFile: None
PackageFileSize: NA

Command output

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### Running command:
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###   /home/biocbuild/bbs-3.12-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data BioSeqClass
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* checking for file ‘BioSeqClass/DESCRIPTION’ ... OK
* preparing ‘BioSeqClass’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building ‘BioSeqClass.Rnw’ using Sweave
Loading required package: scatterplot3d
Warning: Package 'BioSeqClass' is deprecated and will be removed from
  Bioconductor version 3.13
weka.core.UnsupportedAttributeTypeException: Can't handle string attributes!
	at weka.attributeSelection.CfsSubsetEval.buildEvaluator(Unknown Source)
	at weka.attributeSelection.AttributeSelection.SelectAttributes(Unknown Source)
	at weka.attributeSelection.AttributeSelection.SelectAttributes(Unknown Source)
	at weka.attributeSelection.AttributeSelection.SelectAttributes(Unknown Source)
	at weka.attributeSelection.CfsSubsetEval.main(Unknown Source)

Error: processing vignette 'BioSeqClass.Rnw' failed with diagnostics:
 chunk 7 (label = classModel) 
Error in -ncol(train) : invalid argument to unary operator

--- failed re-building ‘BioSeqClass.Rnw’

SUMMARY: processing the following file failed:
  ‘BioSeqClass.Rnw’

Error: Vignette re-building failed.
Execution halted