Back to Multiple platform build/check report for BioC 3.12
A[B]CDEFGHIJKLMNOPQRSTUVWXYZ

INSTALL report for BioMM on tokay1

This page was generated on 2020-11-27 11:56:34 -0500 (Fri, 27 Nov 2020).

TO THE DEVELOPERS/MAINTAINERS OF THE BioMM PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page.
Package 179/1974HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
BioMM 1.6.0
Junfang Chen
Snapshot Date: 2020-11-26 14:42:42 -0500 (Thu, 26 Nov 2020)
URL: https://git.bioconductor.org/packages/BioMM
Branch: RELEASE_3_12
Last Commit: bb432b4
Last Changed Date: 2020-10-27 11:42:47 -0500 (Tue, 27 Oct 2020)
malbec1 Linux (Ubuntu 18.04.4 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
nebbiolo1 Linux (Ubuntu 20.04.1 LTS) / x86_64  OK  OK  OK 
tokay1 Windows Server 2012 R2 Standard / x64 [ OK ] OK  OK  OK UNNEEDED, same version exists in internal repository
merida1 macOS 10.14.6 Mojave / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: BioMM
Version: 1.6.0
Command: C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.12/bioc/src/contrib/BioMM_1.6.0.tar.gz && rm -rf BioMM.buildbin-libdir && mkdir BioMM.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=BioMM.buildbin-libdir BioMM_1.6.0.tar.gz && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL BioMM_1.6.0.zip && rm BioMM_1.6.0.tar.gz BioMM_1.6.0.zip
StartedAt: 2020-11-26 17:33:46 -0500 (Thu, 26 Nov 2020)
EndedAt: 2020-11-26 17:34:52 -0500 (Thu, 26 Nov 2020)
EllapsedTime: 66.0 seconds
RetCode: 0
Status:  OK  

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.12/bioc/src/contrib/BioMM_1.6.0.tar.gz && rm -rf BioMM.buildbin-libdir && mkdir BioMM.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=BioMM.buildbin-libdir BioMM_1.6.0.tar.gz && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL BioMM_1.6.0.zip && rm BioMM_1.6.0.tar.gz BioMM_1.6.0.zip
###
##############################################################################
##############################################################################


  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
100 2551k  100 2551k    0     0  20.0M      0 --:--:-- --:--:-- --:--:-- 20.7M

install for i386

* installing *source* package 'BioMM' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'BioMM'
    finding HTML links ... done
    BioMM                                   html  
    BioMMstage2pred                         html  
    baseGLMnet                              html  
    baseModel                               html  
    baseRandForest                          html  
    baseSVM                                 html  
    cirPlot4pathway                         html  
    classifiACC                             html  
    getDataByFilter                         html  
    getMetrics                              html  
    omics2pathlist                          html  
    plotRankedFeature                       html  
    plotVarExplained                        html  
    predByBS                                html  
    predByCV                                html  
    predByFS                                html  
    reconBySupervised                       html  
    reconByUnsupervised                     html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'BioMM' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'BioMM' as BioMM_1.6.0.zip
* DONE (BioMM)
* installing to library 'C:/Users/biocbuild/bbs-3.12-bioc/R/library'
package 'BioMM' successfully unpacked and MD5 sums checked