Aaron Taudt
| Snapshot Date: 2021-05-05 14:51:38 -0400 (Wed, 05 May 2021) |
| URL: https://git.bioconductor.org/packages/AneuFinder |
| Branch: RELEASE_3_12 |
| Last Commit: 76ec9af |
| Last Changed Date: 2020-10-27 11:12:55 -0400 (Tue, 27 Oct 2020) |
| Back to Multiple platform build/check report for BioC 3.12 |
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This page was generated on 2021-05-06 12:26:49 -0400 (Thu, 06 May 2021).
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To the developers/maintainers of the AneuFinder package: Please make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 56/1974 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| AneuFinder 1.18.0 (landing page) Aaron Taudt
| malbec1 | Linux (Ubuntu 18.04.5 LTS) / x86_64 | OK | OK | OK | | ||||||||
| tokay1 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | OK | | ||||||||
| merida1 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | | ||||||||
| Package: AneuFinder |
| Version: 1.18.0 |
| Command: /home/biocbuild/bbs-3.12-bioc/R/bin/R CMD INSTALL AneuFinder |
| StartedAt: 2021-05-05 16:46:48 -0400 (Wed, 05 May 2021) |
| EndedAt: 2021-05-05 16:47:28 -0400 (Wed, 05 May 2021) |
| EllapsedTime: 39.9 seconds |
| RetCode: 0 |
| Status: OK |
############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/bbs-3.12-bioc/R/bin/R CMD INSTALL AneuFinder ### ############################################################################## ############################################################################## * installing to library ‘/home/biocbuild/bbs-3.12-bioc/R/library’ * installing *source* package ‘AneuFinder’ ... ** using staged installation ** libs g++ -std=gnu++11 -I"/home/biocbuild/bbs-3.12-bioc/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -Wall -c R_interface.cpp -o R_interface.o g++ -std=gnu++11 -I"/home/biocbuild/bbs-3.12-bioc/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -Wall -c densities.cpp -o densities.o g++ -std=gnu++11 -I"/home/biocbuild/bbs-3.12-bioc/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -Wall -c init.cpp -o init.o g++ -std=gnu++11 -I"/home/biocbuild/bbs-3.12-bioc/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -Wall -c loghmm.cpp -o loghmm.o loghmm.cpp:320:0: warning: ignoring #pragma omp parallel [-Wunknown-pragmas] #pragma omp parallel for loghmm.cpp:480:0: warning: ignoring #pragma omp parallel [-Wunknown-pragmas] #pragma omp parallel for loghmm.cpp:518:0: warning: ignoring #pragma omp parallel [-Wunknown-pragmas] #pragma omp parallel for loghmm.cpp:583:0: warning: ignoring #pragma omp parallel [-Wunknown-pragmas] #pragma omp parallel for g++ -std=gnu++11 -I"/home/biocbuild/bbs-3.12-bioc/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -Wall -c scalehmm.cpp -o scalehmm.o scalehmm.cpp:384:0: warning: ignoring #pragma omp parallel [-Wunknown-pragmas] #pragma omp parallel for scalehmm.cpp:400:0: warning: ignoring #pragma omp parallel [-Wunknown-pragmas] #pragma omp parallel for scalehmm.cpp:694:0: warning: ignoring #pragma omp parallel [-Wunknown-pragmas] #pragma omp parallel for scalehmm.cpp:732:0: warning: ignoring #pragma omp parallel [-Wunknown-pragmas] #pragma omp parallel for scalehmm.cpp:791:0: warning: ignoring #pragma omp parallel [-Wunknown-pragmas] #pragma omp parallel for g++ -std=gnu++11 -I"/home/biocbuild/bbs-3.12-bioc/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -Wall -c utility.cpp -o utility.o g++ -std=gnu++11 -shared -L/home/biocbuild/bbs-3.12-bioc/R/lib -L/usr/local/lib -o AneuFinder.so R_interface.o densities.o init.o loghmm.o scalehmm.o utility.o -L/home/biocbuild/bbs-3.12-bioc/R/lib -lR installing to /home/biocbuild/bbs-3.12-bioc/R/library/00LOCK-AneuFinder/00new/AneuFinder/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (AneuFinder)